Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 Y_RNA.303-201ENST00000364998 94 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 Y_RNA.324-201ENST00000365165 102 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 USP9YP20-201ENST00000419224 558 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNND1O60716 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNND1O60716 AP002884.2-201ENST00000471647 395 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 AC114786.4-201ENST00000508771 728 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 SNORA25.17-201ENST00000517184 124 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.65□□□□□ -1.83
CTNND1O60716 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 HMGN2P15-201ENST00000585707 270 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 AC002044.1-201ENST00000606707 158 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 AC093913.1-201ENST00000614178 329 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CTNND1O60716 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CTNND1O60716 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CTNND1O60716 SNORA72.1-201ENST00000363485 129 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 Y_RNA.279-201ENST00000364763 95 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 MIR10A-201ENST00000385043 110 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 MIR34A-201ENST00000385130 110 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNND1O60716 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.64□□□□□ -1.83
CTNND1O60716 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.64□□□□□ -1.83
CTNND1O60716 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNND1O60716 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNND1O60716 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.64□□□□□ -1.83
CTNND1O60716 MIR4672-201ENST00000583126 81 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 AC006023.1-201ENST00000603944 259 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 AC087045.1-201ENST00000605856 382 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 AC004852.3-201ENST00000614131 326 ntBASIC3.64□□□□□ -1.83
CTNND1O60716 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNND1O60716 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTNND1O60716 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CTNND1O60716 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CTNND1O60716 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CTNND1O60716 AC110491.1-201ENST00000562191 2010 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 MIR22-201ENST00000362190 85 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 RNU6-266P-201ENST00000364225 107 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 Z98749.2-208ENST00000381646 500 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 SNORA32.2-201ENST00000384049 122 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 RNU6-510P-201ENST00000391239 108 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 EEF1A1P41-201ENST00000414667 207 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.63□□□□□ -1.83
CTNND1O60716 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.63□□□□□ -1.83
CTNND1O60716 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.63□□□□□ -1.83
CTNND1O60716 NDUFA5P4-201ENST00000436704 385 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 RNU6-1069P-201ENST00000516612 133 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 RN7SKP256-201ENST00000517201 314 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AC069113.1-201ENST00000517763 267 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AP000763.2-201ENST00000540641 163 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.63□□□□□ -1.83
CTNND1O60716 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.63□□□□□ -1.83
CTNND1O60716 RPL12P50-201ENST00000603116 116 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AL121757.2-201ENST00000611223 313 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AL136221.1-201ENST00000621449 509 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.63□□□□□ -1.83
CTNND1O60716 GABRG2-229ENST00000641017 3628 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
CTNND1O60716 RNU6-805P-201ENST00000365643 106 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 RNU6-767P-201ENST00000384132 107 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 RNU6-1148P-201ENST00000410992 104 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 PGBD4P6-201ENST00000421501 610 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 TOMM20P4-201ENST00000427861 435 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 AC098831.1-201ENST00000440661 216 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.62□□□□□ -1.83
CTNND1O60716 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.62□□□□□ -1.83
CTNND1O60716 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.62□□□□□ -1.83
CTNND1O60716 PMCHL2-203ENST00000457791 237 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 SNORA19.2-201ENST00000516013 114 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 RN7SKP272-201ENST00000516988 232 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 SNORA31.21-201ENST00000517180 77 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 BTF3P12-201ENST00000519620 469 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.62□□□□□ -1.83
CTNND1O60716 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.62□□□□□ -1.83
CTNND1O60716 CTHRC1P1-201ENST00000605383 469 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.62□□□□□ -1.83
CTNND1O60716 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTNND1O60716 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTNND1O60716 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CTNND1O60716 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTNND1O60716 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.62□□□□□ -1.83
CTNND1O60716 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 MAPK10-322ENST00000641485 4530 ntBASIC3.62□□□□□ -1.83
CTNND1O60716 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTNND1O60716 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CTNND1O60716 CBX3P1-201ENST00000325243 554 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 SNORD113-7-201ENST00000363762 77 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 SNORD67-201ENST00000390833 111 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTNND1O60716 AL031121.1-201ENST00000406553 254 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 RAP1BP3-201ENST00000407180 549 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 RNA5SP293-201ENST00000410527 113 ntBASIC3.61□□□□□ -1.83
CTNND1O60716 AL139132.1-201ENST00000431587 344 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms