Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.49□□□□□ -1.85
PROM1O43490 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PROM1O43490 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
PROM1O43490 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC073346.2-201ENST00000624724 2058 ntBASIC3.48□□□□□ -1.85
PROM1O43490 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PROM1O43490 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PROM1O43490 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.48□□□□□ -1.85
PROM1O43490 RNU6-1309P-201ENST00000363305 108 ntBASIC3.48□□□□□ -1.85
PROM1O43490 Y_RNA.151-201ENST00000363566 112 ntBASIC3.48□□□□□ -1.85
PROM1O43490 Y_RNA.364-201ENST00000365532 101 ntBASIC3.48□□□□□ -1.85
PROM1O43490 RNU6-1329P-201ENST00000365664 107 ntBASIC3.48□□□□□ -1.85
PROM1O43490 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PROM1O43490 Y_RNA.463-201ENST00000384271 102 ntBASIC3.48□□□□□ -1.85
PROM1O43490 U8.11-201ENST00000384699 133 ntBASIC3.48□□□□□ -1.85
PROM1O43490 U8.12-201ENST00000384701 133 ntBASIC3.48□□□□□ -1.85
PROM1O43490 MIR517A-201ENST00000385001 87 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AL445529.1-201ENST00000398713 389 ntBASIC3.48□□□□□ -1.85
PROM1O43490 RNU6-1025P-201ENST00000410629 104 ntBASIC3.48□□□□□ -1.85
PROM1O43490 RNU6-607P-201ENST00000411283 108 ntBASIC3.48□□□□□ -1.85
PROM1O43490 MCFD2P1-201ENST00000417812 300 ntBASIC3.48□□□□□ -1.85
PROM1O43490 RPL27AP8-201ENST00000424277 446 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.48□□□□□ -1.85
PROM1O43490 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.48□□□□□ -1.85
PROM1O43490 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.48□□□□□ -1.85
PROM1O43490 U8.18-201ENST00000459285 133 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.48□□□□□ -1.85
PROM1O43490 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.48□□□□□ -1.85
PROM1O43490 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.48□□□□□ -1.85
PROM1O43490 RNU6-470P-201ENST00000515954 104 ntBASIC3.48□□□□□ -1.85
PROM1O43490 SCARNA15.2-201ENST00000516409 127 ntBASIC3.48□□□□□ -1.85
PROM1O43490 RNU6-1137P-201ENST00000517073 99 ntBASIC3.48□□□□□ -1.85
PROM1O43490 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.48□□□□□ -1.85
PROM1O43490 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.48□□□□□ -1.85
PROM1O43490 AC010653.1-201ENST00000571108 881 ntBASIC3.48□□□□□ -1.85
PROM1O43490 MIR3921-201ENST00000577308 85 ntBASIC3.48□□□□□ -1.85
PROM1O43490 LRRC37A5P-203ENST00000580181 585 ntBASIC3.48□□□□□ -1.85
PROM1O43490 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.48□□□□□ -1.85
PROM1O43490 AC011494.1-201ENST00000596454 237 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AC005014.2-201ENST00000607795 599 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.48□□□□□ -1.85
PROM1O43490 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.48□□□□□ -1.85
PROM1O43490 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
PROM1O43490 AP000553.6-201ENST00000641242 118 ntBASIC3.48□□□□□ -1.85
PROM1O43490 MAPK10-362ENST00000641864 4484 ntBASIC3.48□□□□□ -1.85
PROM1O43490 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PROM1O43490 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.48□□□□□ -1.85
PROM1O43490 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PROM1O43490 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.47□□□□□ -1.85
PROM1O43490 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
PROM1O43490 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PROM1O43490 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PROM1O43490 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.47□□□□□ -1.85
PROM1O43490 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PROM1O43490 Y_RNA.33-201ENST00000362591 102 ntBASIC3.47□□□□□ -1.85
PROM1O43490 Y_RNA.324-201ENST00000365165 102 ntBASIC3.47□□□□□ -1.85
PROM1O43490 RNU6-395P-201ENST00000365662 106 ntBASIC3.47□□□□□ -1.85
PROM1O43490 SNORA5A-201ENST00000384111 134 ntBASIC3.47□□□□□ -1.85
PROM1O43490 RNU6-790P-201ENST00000384479 105 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AL353621.1-201ENST00000418219 243 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AL356867.1-201ENST00000429623 299 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AL645568.3-201ENST00000433683 316 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.47□□□□□ -1.85
PROM1O43490 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.47□□□□□ -1.85
PROM1O43490 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.47□□□□□ -1.85
PROM1O43490 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.47□□□□□ -1.85
PROM1O43490 RPL12P25-201ENST00000455592 494 ntBASIC3.47□□□□□ -1.85
PROM1O43490 SNORD5.1-201ENST00000458800 75 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AC022493.1-201ENST00000492984 337 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AC022493.2-201ENST00000506122 481 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.47□□□□□ -1.85
PROM1O43490 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.47□□□□□ -1.85
PROM1O43490 RNA5SP384-201ENST00000516615 116 ntBASIC3.47□□□□□ -1.85
PROM1O43490 RNU6-699P-201ENST00000517081 110 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.47□□□□□ -1.85
PROM1O43490 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.47□□□□□ -1.85
PROM1O43490 MIR1273C-201ENST00000578669 77 ntBASIC3.47□□□□□ -1.85
PROM1O43490 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.47□□□□□ -1.85
PROM1O43490 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.47□□□□□ -1.85
PROM1O43490 AC008962.1-201ENST00000605729 304 ntBASIC3.47□□□□□ -1.85
PROM1O43490 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PROM1O43490 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.47□□□□□ -1.85
PROM1O43490 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PROM1O43490 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PROM1O43490 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
PROM1O43490 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.46□□□□□ -1.86
PROM1O43490 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PROM1O43490 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PROM1O43490 Y_RNA.245-201ENST00000364493 95 ntBASIC3.46□□□□□ -1.86
PROM1O43490 RNU6-1105P-201ENST00000384774 107 ntBASIC3.46□□□□□ -1.86
PROM1O43490 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PROM1O43490 MRPL42P3-201ENST00000401492 326 ntBASIC3.46□□□□□ -1.86
PROM1O43490 U3.42-201ENST00000408746 214 ntBASIC3.46□□□□□ -1.86
PROM1O43490 Y_RNA.605-201ENST00000410577 105 ntBASIC3.46□□□□□ -1.86
PROM1O43490 CYCSP33-201ENST00000414485 327 ntBASIC3.46□□□□□ -1.86
PROM1O43490 AL158156.1-201ENST00000422509 473 ntBASIC3.46□□□□□ -1.86
PROM1O43490 AC018865.2-201ENST00000423631 129 ntBASIC3.46□□□□□ -1.86
PROM1O43490 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.46□□□□□ -1.86
PROM1O43490 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms