Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.24□□□□□ -1.73
SRGAP3O43295 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.24□□□□□ -1.73
SRGAP3O43295 AC074050.1-201ENST00000563247 211 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 MIR5188-201ENST00000583467 113 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 AC125232.2-201ENST00000592457 143 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 AC006557.5-201ENST00000603126 811 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 AC016727.2-201ENST00000603988 621 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 MTND4LP5-201ENST00000605152 292 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 MTND5P7-201ENST00000413558 1798 ntBASIC4.24□□□□□ -1.73
SRGAP3O43295 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.24□□□□□ -1.73
SRGAP3O43295 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SRGAP3O43295 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SRGAP3O43295 AC008669.1-201ENST00000565823 2178 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 SNORA63.1-201ENST00000362493 131 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 RNU4-42P-201ENST00000364738 142 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 RNU4-70P-201ENST00000384579 139 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 RNU6-882P-201ENST00000391025 103 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SRGAP3O43295 RNU6-1156P-201ENST00000410365 100 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 AC063979.1-201ENST00000415539 377 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.23□□□□□ -1.73
SRGAP3O43295 RPS3AP12-201ENST00000443616 753 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 OR2AQ1P-201ENST00000451972 200 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 RPS24P6-201ENST00000452670 400 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 PRSS3P4-201ENST00000453323 162 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.23□□□□□ -1.73
SRGAP3O43295 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.23□□□□□ -1.73
SRGAP3O43295 RPL21P10-201ENST00000463521 490 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 AC022447.4-201ENST00000504053 364 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.23□□□□□ -1.73
SRGAP3O43295 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.23□□□□□ -1.73
SRGAP3O43295 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SRGAP3O43295 AP000889.1-201ENST00000530968 660 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.23□□□□□ -1.73
SRGAP3O43295 MIR4273-201ENST00000582824 84 ntBASIC4.23□□□□□ -1.73
SRGAP3O43295 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.23□□□□□ -1.73
SRGAP3O43295 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SRGAP3O43295 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.23□□□□□ -1.73
SRGAP3O43295 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SRGAP3O43295 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SRGAP3O43295 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SRGAP3O43295 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SRGAP3O43295 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.23□□□□□ -1.73
SRGAP3O43295 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SRGAP3O43295 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.22□□□□□ -1.73
SRGAP3O43295 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.22□□□□□ -1.73
SRGAP3O43295 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SRGAP3O43295 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SRGAP3O43295 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SRGAP3O43295 RNU6-76P-201ENST00000384060 104 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 RNU6-472P-201ENST00000384299 107 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 RNU6-933P-201ENST00000384424 107 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 Y_RNA.577-201ENST00000384794 101 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 MIR153-1-201ENST00000384914 90 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 RNU6-837P-201ENST00000391056 108 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SRGAP3O43295 RPL21P1-201ENST00000399532 476 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 MIR1302-6-201ENST00000408466 90 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AL030996.1-201ENST00000411430 235 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AL451062.2-201ENST00000427515 271 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AC006946.1-201ENST00000429106 328 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.22□□□□□ -1.73
SRGAP3O43295 DAP3P1-201ENST00000441522 278 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 RPL29P29-201ENST00000448725 423 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 MTCO3P8-201ENST00000453691 755 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 CEACAMP4-201ENST00000457676 421 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 RNU7-169P-201ENST00000459456 61 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.22□□□□□ -1.73
SRGAP3O43295 ACA59.1-201ENST00000515966 143 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 SNORA31.22-201ENST00000517204 135 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.22□□□□□ -1.73
SRGAP3O43295 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.22□□□□□ -1.73
SRGAP3O43295 CBX3P8-201ENST00000532412 525 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.22□□□□□ -1.73
SRGAP3O43295 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.22□□□□□ -1.73
SRGAP3O43295 AC006600.1-201ENST00000572529 153 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.22□□□□□ -1.73
SRGAP3O43295 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.22□□□□□ -1.73
SRGAP3O43295 BDH2P1-201ENST00000602288 736 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AC007390.2-201ENST00000606229 3803 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 AC084757.4-201ENST00000616350 526 ntBASIC4.22□□□□□ -1.73
SRGAP3O43295 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SRGAP3O43295 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SRGAP3O43295 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
SRGAP3O43295 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.21□□□□□ -1.73
SRGAP3O43295 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SRGAP3O43295 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SRGAP3O43295 RNU6-174P-201ENST00000410406 106 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 RPS6P12-201ENST00000432491 726 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 SUMO1P3-201ENST00000439961 304 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 RPS4XP2-201ENST00000458402 793 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.21□□□□□ -1.74
SRGAP3O43295 FO393415.2-201ENST00000480085 343 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 RPS15AP34-201ENST00000487776 387 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.21□□□□□ -1.74
SRGAP3O43295 SNORA40.14-201ENST00000516543 86 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.21□□□□□ -1.74
SRGAP3O43295 HSPE1P20-201ENST00000538133 289 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 AC023157.2-201ENST00000540596 141 ntBASIC4.21□□□□□ -1.74
SRGAP3O43295 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms