Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC244636.1-201ENST00000421152 228 ntBASIC7.94□□□□□ -1.14
MSH5O43196 U8.18-201ENST00000459285 133 ntBASIC7.94□□□□□ -1.14
MSH5O43196 RPS23P2-201ENST00000463671 415 ntBASIC7.94□□□□□ -1.14
MSH5O43196 UBE2Q2P9-201ENST00000490086 202 ntBASIC7.94□□□□□ -1.14
MSH5O43196 SEPT14P17-201ENST00000617978 177 ntBASIC7.94□□□□□ -1.14
MSH5O43196 AC079753.1-201ENST00000623243 3868 ntBASIC7.94□□□□□ -1.14
MSH5O43196 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH5O43196 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH5O43196 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
MSH5O43196 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH5O43196 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
MSH5O43196 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
MSH5O43196 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
MSH5O43196 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
MSH5O43196 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH5O43196 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH5O43196 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH5O43196 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
MSH5O43196 RNA5SP453-201ENST00000362503 119 ntBASIC7.93□□□□□ -1.14
MSH5O43196 RNU6-173P-201ENST00000364215 104 ntBASIC7.93□□□□□ -1.14
MSH5O43196 Y_RNA.440-201ENST00000384120 114 ntBASIC7.93□□□□□ -1.14
MSH5O43196 Y_RNA.532-201ENST00000384590 113 ntBASIC7.93□□□□□ -1.14
MSH5O43196 RPS3AP2-201ENST00000407190 754 ntBASIC7.93□□□□□ -1.14
MSH5O43196 Y_RNA.625-201ENST00000411256 107 ntBASIC7.93□□□□□ -1.14
MSH5O43196 AC113412.1-201ENST00000425840 504 ntBASIC7.93□□□□□ -1.14
MSH5O43196 RPS27P18-201ENST00000431701 247 ntBASIC7.93□□□□□ -1.14
MSH5O43196 FTLP8-201ENST00000446770 267 ntBASIC7.93□□□□□ -1.14
MSH5O43196 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.93□□□□□ -1.14
MSH5O43196 RBMY2UP-201ENST00000453474 324 ntBASIC7.93□□□□□ -1.14
MSH5O43196 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.93□□□□□ -1.14
MSH5O43196 AC126915.2-201ENST00000610957 190 ntBASIC7.93□□□□□ -1.14
MSH5O43196 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC7.93□□□□□ -1.14
MSH5O43196 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.93□□□□□ -1.14
MSH5O43196 AC002543.1-201ENST00000299783 1954 ntBASIC7.93□□□□□ -1.14
MSH5O43196 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
MSH5O43196 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
MSH5O43196 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
MSH5O43196 AC018809.2-201ENST00000602436 3823 ntBASIC7.92□□□□□ -1.14
MSH5O43196 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.92□□□□□ -1.14
MSH5O43196 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
MSH5O43196 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.92□□□□□ -1.14
MSH5O43196 RNU7-156P-201ENST00000517214 74 ntBASIC7.92□□□□□ -1.14
MSH5O43196 IGHV1-14-201ENST00000523391 241 ntBASIC7.92□□□□□ -1.14
MSH5O43196 MIR4778-201ENST00000577635 80 ntBASIC7.92□□□□□ -1.14
MSH5O43196 MIR6748-201ENST00000610433 71 ntBASIC7.92□□□□□ -1.14
MSH5O43196 AL691477.1-201ENST00000624398 162 ntBASIC7.92□□□□□ -1.14
MSH5O43196 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.92□□□□□ -1.14
MSH5O43196 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 AL139811.1-201ENST00000424779 2299 ntBASIC7.92□□□□□ -1.14
MSH5O43196 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
MSH5O43196 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
MSH5O43196 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
MSH5O43196 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.91□□□□□ -1.14
MSH5O43196 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 SNORA73.1-201ENST00000363107 205 ntBASIC7.91□□□□□ -1.14
MSH5O43196 RN7SKP186-201ENST00000365371 303 ntBASIC7.91□□□□□ -1.14
MSH5O43196 SNORD14D-201ENST00000384390 87 ntBASIC7.91□□□□□ -1.14
MSH5O43196 SNORA70-201ENST00000384436 135 ntBASIC7.91□□□□□ -1.14
MSH5O43196 Y_RNA.596-201ENST00000410462 109 ntBASIC7.91□□□□□ -1.14
MSH5O43196 RNU6-977P-201ENST00000516411 103 ntBASIC7.91□□□□□ -1.14
MSH5O43196 MIR1269B-201ENST00000580405 75 ntBASIC7.91□□□□□ -1.14
MSH5O43196 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
MSH5O43196 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
MSH5O43196 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
MSH5O43196 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.91□□□□□ -1.14
MSH5O43196 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH5O43196 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH5O43196 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH5O43196 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
MSH5O43196 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
MSH5O43196 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH5O43196 RNU5F-1-201ENST00000362507 117 ntBASIC7.9□□□□□ -1.14
MSH5O43196 RNU4-34P-201ENST00000410431 124 ntBASIC7.9□□□□□ -1.14
MSH5O43196 RNA5SP144-201ENST00000410846 116 ntBASIC7.9□□□□□ -1.14
MSH5O43196 RN7SKP17-201ENST00000411242 351 ntBASIC7.9□□□□□ -1.14
MSH5O43196 RPL27AP8-201ENST00000424277 446 ntBASIC7.9□□□□□ -1.14
MSH5O43196 AC092967.1-201ENST00000449016 481 ntBASIC7.9□□□□□ -1.14
MSH5O43196 AC010401.1-201ENST00000463867 348 ntBASIC7.9□□□□□ -1.14
MSH5O43196 AC008155.2-201ENST00000464337 397 ntBASIC7.9□□□□□ -1.14
MSH5O43196 RN7SL466P-201ENST00000497546 295 ntBASIC7.9□□□□□ -1.14
MSH5O43196 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.9□□□□□ -1.14
MSH5O43196 AC010547.6-201ENST00000571789 193 ntBASIC7.9□□□□□ -1.14
MSH5O43196 MIR4776-2-201ENST00000580204 80 ntBASIC7.9□□□□□ -1.14
MSH5O43196 MIR6809-201ENST00000612189 116 ntBASIC7.9□□□□□ -1.14
MSH5O43196 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC7.9□□□□□ -1.14
MSH5O43196 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.9□□□□□ -1.15
MSH5O43196 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
MSH5O43196 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms