Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC010099.1-201ENST00000455434 375 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AC092989.1-201ENST00000481235 277 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 RPL38P4-201ENST00000502376 214 ntBASIC2.42□□□□□ -2.02
PHF1O43189 RBBP4P6-201ENST00000508098 202 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AC006445.2-201ENST00000510061 472 ntBASIC2.42□□□□□ -2.02
PHF1O43189 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.42□□□□□ -2.02
PHF1O43189 RNA5SP76-201ENST00000516277 87 ntBASIC2.42□□□□□ -2.02
PHF1O43189 SNORD60.2-201ENST00000516883 86 ntBASIC2.42□□□□□ -2.02
PHF1O43189 CASP1P1-201ENST00000526345 212 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PHF1O43189 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 HIF1AP1-201ENST00000553642 175 ntBASIC2.42□□□□□ -2.02
PHF1O43189 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.42□□□□□ -2.02
PHF1O43189 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 AC002545.1-201ENST00000592511 181 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AC022893.3-201ENST00000607665 437 ntBASIC2.42□□□□□ -2.02
PHF1O43189 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PHF1O43189 RMST_3.1-201ENST00000611651 109 ntBASIC2.42□□□□□ -2.02
PHF1O43189 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AL359547.2-201ENST00000615810 418 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AL354950.2-201ENST00000617939 290 ntBASIC2.42□□□□□ -2.02
PHF1O43189 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.42□□□□□ -2.02
PHF1O43189 ASNSP3-201ENST00000451989 1306 ntBASIC2.42□□□□□ -2.02
PHF1O43189 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
PHF1O43189 AL049641.1-201ENST00000441055 1948 ntBASIC2.41□□□□□ -2.02
PHF1O43189 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PHF1O43189 UBE2L2-201ENST00000254302 429 ntBASIC2.41□□□□□ -2.02
PHF1O43189 Y_RNA.295-201ENST00000364918 102 ntBASIC2.41□□□□□ -2.02
PHF1O43189 SNORA9.2-201ENST00000365361 133 ntBASIC2.41□□□□□ -2.02
PHF1O43189 SNORA18.3-201ENST00000384122 132 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL590004.2-201ENST00000404787 371 ntBASIC2.41□□□□□ -2.02
PHF1O43189 RNA5SP118-201ENST00000410385 109 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.41□□□□□ -2.02
PHF1O43189 EEF1A1P40-201ENST00000412883 573 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC080125.1-201ENST00000414888 684 ntBASIC2.41□□□□□ -2.02
PHF1O43189 OR6C66P-201ENST00000414917 930 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.41□□□□□ -2.02
PHF1O43189 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.41□□□□□ -2.02
PHF1O43189 RPL36AP53-201ENST00000432891 316 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL591212.2-201ENST00000433923 257 ntBASIC2.41□□□□□ -2.02
PHF1O43189 HMGB1P31-201ENST00000437242 427 ntBASIC2.41□□□□□ -2.02
PHF1O43189 DPPA3P1-201ENST00000448050 469 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.41□□□□□ -2.02
PHF1O43189 SNORD109B-201ENST00000458961 67 ntBASIC2.41□□□□□ -2.02
PHF1O43189 SNORD109A-201ENST00000459128 67 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC006512.1-201ENST00000468816 291 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL160314.1-201ENST00000490836 438 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC069439.1-201ENST00000494739 167 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC116353.2-201ENST00000505332 712 ntBASIC2.41□□□□□ -2.02
PHF1O43189 SEM1P1-201ENST00000506694 209 ntBASIC2.41□□□□□ -2.02
PHF1O43189 MTCO3P9-201ENST00000506989 781 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC104806.1-201ENST00000508720 308 ntBASIC2.41□□□□□ -2.02
PHF1O43189 RNU6-123P-201ENST00000516163 102 ntBASIC2.41□□□□□ -2.02
PHF1O43189 Y_RNA.676-201ENST00000516393 96 ntBASIC2.41□□□□□ -2.02
PHF1O43189 RNU6-914P-201ENST00000516749 109 ntBASIC2.41□□□□□ -2.02
PHF1O43189 SUB1P1-201ENST00000524415 382 ntBASIC2.41□□□□□ -2.02
PHF1O43189 MTND1P35-201ENST00000526739 508 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.41□□□□□ -2.02
PHF1O43189 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.41□□□□□ -2.02
PHF1O43189 AC107016.2-201ENST00000547968 190 ntBASIC2.41□□□□□ -2.02
PHF1O43189 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.41□□□□□ -2.02
PHF1O43189 AL133241.1-201ENST00000556832 487 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.41□□□□□ -2.02
PHF1O43189 MTCO3P23-201ENST00000561363 289 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.41□□□□□ -2.02
PHF1O43189 MIR3609-201ENST00000582661 80 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC008739.2-201ENST00000597006 317 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AP000907.4-201ENST00000604143 237 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC008945.2-201ENST00000606056 604 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AL627309.6-201ENST00000606857 840 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC130324.3-201ENST00000614165 542 ntBASIC2.41□□□□□ -2.02
PHF1O43189 DUXAP9-208ENST00000622815 614 ntBASIC2.41□□□□□ -2.02
PHF1O43189 AC110079.1-202ENST00000635213 138 ntBASIC2.41□□□□□ -2.02
PHF1O43189 TPTE2P4-201ENST00000258589 1605 ntBASIC2.41□□□□□ -2.02
PHF1O43189 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
PHF1O43189 Y_RNA.88-201ENST00000363029 99 ntBASIC2.4□□□□□ -2.03
PHF1O43189 U8.2-201ENST00000363156 134 ntBASIC2.4□□□□□ -2.03
PHF1O43189 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.4□□□□□ -2.03
PHF1O43189 RNU1-109P-201ENST00000383960 147 ntBASIC2.4□□□□□ -2.03
PHF1O43189 RNU6-851P-201ENST00000384565 107 ntBASIC2.4□□□□□ -2.03
PHF1O43189 MIR512-1-201ENST00000384913 84 ntBASIC2.4□□□□□ -2.03
PHF1O43189 RNU6-1068P-201ENST00000410958 103 ntBASIC2.4□□□□□ -2.03
PHF1O43189 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.4□□□□□ -2.03
PHF1O43189 HMGB1P27-201ENST00000431429 603 ntBASIC2.4□□□□□ -2.03
PHF1O43189 PIGFP3-201ENST00000441918 722 ntBASIC2.4□□□□□ -2.03
PHF1O43189 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.4□□□□□ -2.03
PHF1O43189 AL513328.1-201ENST00000446460 224 ntBASIC2.4□□□□□ -2.03
PHF1O43189 NFU1P2-201ENST00000448700 469 ntBASIC2.4□□□□□ -2.03
PHF1O43189 GSTA11P-201ENST00000452866 669 ntBASIC2.4□□□□□ -2.03
PHF1O43189 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.4□□□□□ -2.03
PHF1O43189 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.4□□□□□ -2.03
PHF1O43189 SUMO2P6-201ENST00000505273 288 ntBASIC2.4□□□□□ -2.03
PHF1O43189 ANXA2P1-201ENST00000505539 926 ntBASIC2.4□□□□□ -2.03
PHF1O43189 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.4□□□□□ -2.03
PHF1O43189 RNA5SP401-201ENST00000515920 127 ntBASIC2.4□□□□□ -2.03
PHF1O43189 RNA5SP24-201ENST00000516478 95 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms