Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MTND1P12-201ENST00000455231 147 ntBASIC1.84□□□□□ -2.11
LSM1O15116 PPP1R2P5-201ENST00000457256 603 ntBASIC1.84□□□□□ -2.11
LSM1O15116 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM1O15116 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM1O15116 HSPE1P18-201ENST00000517602 280 ntBASIC1.84□□□□□ -2.11
LSM1O15116 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM1O15116 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM1O15116 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM1O15116 MTND4P33-201ENST00000556706 766 ntBASIC1.84□□□□□ -2.11
LSM1O15116 MIR3118-1-201ENST00000581787 76 ntBASIC1.84□□□□□ -2.11
LSM1O15116 AP001004.1-201ENST00000582468 324 ntBASIC1.84□□□□□ -2.11
LSM1O15116 AL078605.1-201ENST00000603529 500 ntBASIC1.84□□□□□ -2.11
LSM1O15116 AC096772.1-201ENST00000609146 564 ntBASIC1.84□□□□□ -2.11
LSM1O15116 AL355816.2-201ENST00000610049 647 ntBASIC1.84□□□□□ -2.11
LSM1O15116 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM1O15116 AC092656.1-203ENST00000624134 423 ntBASIC1.84□□□□□ -2.11
LSM1O15116 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LSM1O15116 RBBP8P1-201ENST00000449447 1844 ntBASIC1.84□□□□□ -2.12
LSM1O15116 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
LSM1O15116 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 RNU6-1032P-201ENST00000384100 107 ntBASIC1.83□□□□□ -2.12
LSM1O15116 SNORA40.19-201ENST00000390846 128 ntBASIC1.83□□□□□ -2.12
LSM1O15116 SNORA3.2-201ENST00000408221 125 ntBASIC1.83□□□□□ -2.12
LSM1O15116 AL158823.1-201ENST00000418441 478 ntBASIC1.83□□□□□ -2.12
LSM1O15116 EIF1AXP1-201ENST00000419267 435 ntBASIC1.83□□□□□ -2.12
LSM1O15116 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM1O15116 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.83□□□□□ -2.12
LSM1O15116 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM1O15116 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LSM1O15116 AC093899.1-201ENST00000457984 376 ntBASIC1.83□□□□□ -2.12
LSM1O15116 AC007182.2-201ENST00000489251 402 ntBASIC1.83□□□□□ -2.12
LSM1O15116 AC091951.3-201ENST00000504093 246 ntBASIC1.83□□□□□ -2.12
LSM1O15116 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 RNU2-10P-201ENST00000516375 211 ntBASIC1.83□□□□□ -2.12
LSM1O15116 RNU5A-4P-201ENST00000516588 111 ntBASIC1.83□□□□□ -2.12
LSM1O15116 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM1O15116 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM1O15116 AC022880.1-201ENST00000534017 973 ntBASIC1.83□□□□□ -2.12
LSM1O15116 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM1O15116 AC092325.1-201ENST00000566449 554 ntBASIC1.83□□□□□ -2.12
LSM1O15116 RPL30P11-203ENST00000598995 310 ntBASIC1.83□□□□□ -2.12
LSM1O15116 ELOCP5-201ENST00000604924 333 ntBASIC1.83□□□□□ -2.12
LSM1O15116 AC092106.3-201ENST00000611308 722 ntBASIC1.83□□□□□ -2.12
LSM1O15116 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
LSM1O15116 AL359314.1-201ENST00000616913 261 ntBASIC1.83□□□□□ -2.12
LSM1O15116 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
LSM1O15116 AC091953.2-201ENST00000623979 160 ntBASIC1.83□□□□□ -2.12
LSM1O15116 HAUS6P2-201ENST00000433254 2404 ntBASIC1.83□□□□□ -2.12
LSM1O15116 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
LSM1O15116 SNORD114-19-201ENST00000363072 75 ntBASIC1.82□□□□□ -2.12
LSM1O15116 RNU4-42P-201ENST00000364738 142 ntBASIC1.82□□□□□ -2.12
LSM1O15116 RNY4P16-201ENST00000364768 94 ntBASIC1.82□□□□□ -2.12
LSM1O15116 RNU6-622P-201ENST00000384272 103 ntBASIC1.82□□□□□ -2.12
LSM1O15116 MIR23A-201ENST00000385245 73 ntBASIC1.82□□□□□ -2.12
LSM1O15116 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
LSM1O15116 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
LSM1O15116 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
LSM1O15116 AL365338.1-201ENST00000422282 858 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AL022400.1-201ENST00000423946 935 ntBASIC1.82□□□□□ -2.12
LSM1O15116 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.82□□□□□ -2.12
LSM1O15116 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.82□□□□□ -2.12
LSM1O15116 AL606517.1-201ENST00000446914 387 ntBASIC1.82□□□□□ -2.12
LSM1O15116 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM1O15116 NDUFB1P2-201ENST00000449477 176 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AC008549.1-201ENST00000512900 643 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AC022616.6-201ENST00000520479 119 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.82□□□□□ -2.12
LSM1O15116 CR383656.8-201ENST00000549046 145 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AC093249.1-201ENST00000567049 203 ntBASIC1.82□□□□□ -2.12
LSM1O15116 MIR4513-201ENST00000581077 86 ntBASIC1.82□□□□□ -2.12
LSM1O15116 SNRPGP17-201ENST00000603780 214 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AL391834.2-201ENST00000609982 546 ntBASIC1.82□□□□□ -2.12
LSM1O15116 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM1O15116 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
LSM1O15116 AC006338.1-201ENST00000618453 749 ntBASIC1.82□□□□□ -2.12
LSM1O15116 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LSM1O15116 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM1O15116 SNORD113-6-201ENST00000363345 75 ntBASIC1.81□□□□□ -2.12
LSM1O15116 RNU6-190P-201ENST00000384154 102 ntBASIC1.81□□□□□ -2.12
LSM1O15116 MIR186-201ENST00000384988 86 ntBASIC1.81□□□□□ -2.12
LSM1O15116 SNORD115.1-201ENST00000391109 76 ntBASIC1.81□□□□□ -2.12
LSM1O15116 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
LSM1O15116 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
LSM1O15116 Y_RNA.623-201ENST00000411128 95 ntBASIC1.81□□□□□ -2.12
LSM1O15116 MTCO2P8-201ENST00000412213 658 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AL031779.1-201ENST00000415663 330 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AC106883.1-201ENST00000418805 562 ntBASIC1.81□□□□□ -2.12
LSM1O15116 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM1O15116 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM1O15116 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM1O15116 AL139415.2-201ENST00000431968 163 ntBASIC1.81□□□□□ -2.12
LSM1O15116 MTCO3P5-201ENST00000433620 714 ntBASIC1.81□□□□□ -2.12
LSM1O15116 MTND2P29-201ENST00000438595 412 ntBASIC1.81□□□□□ -2.12
LSM1O15116 MTND6P13-201ENST00000443510 523 ntBASIC1.81□□□□□ -2.12
LSM1O15116 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.81□□□□□ -2.12
LSM1O15116 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms