Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CUX2O14529 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.62□□□□□ -1.99
CUX2O14529 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.62□□□□□ -1.99
CUX2O14529 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
CUX2O14529 MTATP6P15-201ENST00000527233 835 ntBASIC2.62□□□□□ -1.99
CUX2O14529 NACAP3-201ENST00000552100 481 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.62□□□□□ -1.99
CUX2O14529 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.62□□□□□ -1.99
CUX2O14529 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AP001981.2-201ENST00000603241 418 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AC004805.2-201ENST00000605382 482 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AC091965.4-201ENST00000607691 587 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AL355472.4-201ENST00000610233 626 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AC008498.1-201ENST00000613012 531 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AL136313.1-201ENST00000624804 202 ntBASIC2.62□□□□□ -1.99
CUX2O14529 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CUX2O14529 ELOCP14-201ENST00000428070 331 ntBASIC2.61□□□□□ -1.99
CUX2O14529 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.61□□□□□ -1.99
CUX2O14529 ELOCP7-201ENST00000439968 331 ntBASIC2.61□□□□□ -1.99
CUX2O14529 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.61□□□□□ -1.99
CUX2O14529 AC020550.1-201ENST00000447385 163 ntBASIC2.61□□□□□ -1.99
CUX2O14529 RPL26P9-201ENST00000457466 433 ntBASIC2.61□□□□□ -1.99
CUX2O14529 SNRPFP3-201ENST00000457792 225 ntBASIC2.61□□□□□ -1.99
CUX2O14529 AC013267.1-201ENST00000458227 267 ntBASIC2.61□□□□□ -1.99
CUX2O14529 RPS29P20-201ENST00000489592 171 ntBASIC2.61□□□□□ -1.99
CUX2O14529 SUMO2P6-201ENST00000505273 288 ntBASIC2.61□□□□□ -1.99
CUX2O14529 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.61□□□□□ -1.99
CUX2O14529 AC116347.2-201ENST00000514912 523 ntBASIC2.61□□□□□ -1.99
CUX2O14529 RNU6-678P-201ENST00000516832 109 ntBASIC2.61□□□□□ -1.99
CUX2O14529 RNU6-64P-201ENST00000517119 105 ntBASIC2.61□□□□□ -1.99
CUX2O14529 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.61□□□□□ -1.99
CUX2O14529 AL391261.3-201ENST00000557194 520 ntBASIC2.61□□□□□ -1.99
CUX2O14529 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.61□□□□□ -1.99
CUX2O14529 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.61□□□□□ -1.99
CUX2O14529 AC079395.3-201ENST00000615161 484 ntBASIC2.61□□□□□ -1.99
CUX2O14529 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.61□□□□□ -1.99
CUX2O14529 CR848007.1-201ENST00000442354 1699 ntBASIC2.61□□□□□ -1.99
CUX2O14529 RNU2-62P-201ENST00000410868 191 ntBASIC2.6□□□□□ -1.99
CUX2O14529 AC078974.1-201ENST00000411597 223 ntBASIC2.6□□□□□ -1.99
CUX2O14529 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.6□□□□□ -1.99
CUX2O14529 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 SNRPEP9-201ENST00000436794 238 ntBASIC2.6□□□□□ -1.99
CUX2O14529 Z80107.1-201ENST00000436830 412 ntBASIC2.6□□□□□ -1.99
CUX2O14529 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 CECR9-201ENST00000453421 199 ntBASIC2.6□□□□□ -1.99
CUX2O14529 RPF2P2-201ENST00000504693 896 ntBASIC2.6□□□□□ -1.99
CUX2O14529 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CUX2O14529 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.6□□□□□ -1.99
CUX2O14529 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.6□□□□□ -1.99
CUX2O14529 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.6□□□□□ -1.99
CUX2O14529 MIR4307-201ENST00000582802 84 ntBASIC2.6□□□□□ -1.99
CUX2O14529 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.6□□□□□ -1.99
CUX2O14529 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CUX2O14529 AL589743.1-201ENST00000551932 2712 ntBASIC2.6□□□□□ -1.99
CUX2O14529 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CUX2O14529 RNU6-1167P-201ENST00000363227 94 ntBASIC2.59□□□□□ -1.99
CUX2O14529 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.59□□□□□ -1.99
CUX2O14529 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.59□□□□□ -1.99
CUX2O14529 RPL22P17-201ENST00000438729 315 ntBASIC2.59□□□□□ -1.99
CUX2O14529 AC005094.1-201ENST00000440420 368 ntBASIC2.59□□□□□ -1.99
CUX2O14529 MTATP6P30-201ENST00000443540 664 ntBASIC2.59□□□□□ -1.99
CUX2O14529 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
CUX2O14529 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.59□□□□□ -1.99
CUX2O14529 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.59□□□□□ -1.99
CUX2O14529 RNU6-143P-201ENST00000516942 93 ntBASIC2.59□□□□□ -1.99
CUX2O14529 RN7SKP258-201ENST00000517151 304 ntBASIC2.59□□□□□ -1.99
CUX2O14529 AC084851.1-201ENST00000529105 249 ntBASIC2.59□□□□□ -1.99
CUX2O14529 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.59□□□□□ -1.99
CUX2O14529 BCRP9-201ENST00000605312 388 ntBASIC2.59□□□□□ -1.99
CUX2O14529 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.59□□□□□ -1.99
CUX2O14529 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.59□□□□□ -2
CUX2O14529 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.59□□□□□ -2
CUX2O14529 RNU6-1284P-201ENST00000363701 100 ntBASIC2.58□□□□□ -2
CUX2O14529 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
CUX2O14529 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.58□□□□□ -2
CUX2O14529 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 AC098592.1-201ENST00000419352 333 ntBASIC2.58□□□□□ -2
CUX2O14529 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.58□□□□□ -2
CUX2O14529 TIMM9P1-201ENST00000436122 256 ntBASIC2.58□□□□□ -2
CUX2O14529 AL078601.1-201ENST00000444542 271 ntBASIC2.58□□□□□ -2
CUX2O14529 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 OR6C5P-201ENST00000452388 923 ntBASIC2.58□□□□□ -2
CUX2O14529 SEM1P1-201ENST00000506694 209 ntBASIC2.58□□□□□ -2
CUX2O14529 AC113155.1-201ENST00000511141 769 ntBASIC2.58□□□□□ -2
CUX2O14529 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 DUXAP5-201ENST00000529668 529 ntBASIC2.58□□□□□ -2
CUX2O14529 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.58□□□□□ -2
CUX2O14529 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.58□□□□□ -2
CUX2O14529 AC234772.3-201ENST00000602277 528 ntBASIC2.58□□□□□ -2
CUX2O14529 AP000811.1-201ENST00000603803 651 ntBASIC2.58□□□□□ -2
CUX2O14529 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CUX2O14529 AP000560.1-201ENST00000624150 1937 ntBASIC2.58□□□□□ -2
CUX2O14529 AL391994.1-201ENST00000254724 282 ntBASIC2.58□□□□□ -2
CUX2O14529 SNORD114-27-201ENST00000363766 70 ntBASIC2.58□□□□□ -2
CUX2O14529 RNU1-133P-201ENST00000364867 167 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms