Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
AP3B1O00203 SNORD115-3-201ENST00000363100 82 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 RNU6-843P-201ENST00000384454 104 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 RNU6-83P-201ENST00000384568 112 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 RSL24D1P4-201ENST00000400938 484 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 MTCO2P21-201ENST00000419780 677 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.91□□□□□ -2.1
AP3B1O00203 AL009048.1-201ENST00000450437 298 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AC020699.1-201ENST00000505161 445 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
AP3B1O00203 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.91□□□□□ -2.1
AP3B1O00203 RNU2-10P-201ENST00000516375 211 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.91□□□□□ -2.1
AP3B1O00203 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.91□□□□□ -2.1
AP3B1O00203 HSBP1P1-201ENST00000555205 166 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 SEPT7P9-203ENST00000604116 343 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AC112187.2-201ENST00000604345 283 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AL391813.2-201ENST00000609113 322 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.91□□□□□ -2.1
AP3B1O00203 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AL139418.1-201ENST00000613613 177 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AC130324.3-201ENST00000614165 542 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.91□□□□□ -2.1
AP3B1O00203 AC090517.3-201ENST00000625170 141 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
AP3B1O00203 AC103706.2-201ENST00000638080 240 ntBASIC1.91□□□□□ -2.1
AP3B1O00203 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
AP3B1O00203 MTND4P16-201ENST00000466108 1367 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 Y_RNA.46-201ENST00000362695 102 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 RNU6-611P-201ENST00000384276 104 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 RNU2-36P-201ENST00000410361 191 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 VN1R36P-201ENST00000414936 291 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 EIF4EP2-201ENST00000422816 654 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 MTCO2P23-201ENST00000425216 680 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.9□□□□□ -2.11
AP3B1O00203 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.9□□□□□ -2.11
AP3B1O00203 AL136380.1-201ENST00000447970 162 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.9□□□□□ -2.11
AP3B1O00203 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.9□□□□□ -2.11
AP3B1O00203 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 CYCSP27-201ENST00000527643 293 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 GNAI2P1-201ENST00000541815 315 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 ARL2BPP2-201ENST00000550907 489 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 AC092325.1-201ENST00000566449 554 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 MIR4307-201ENST00000582802 84 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 AC013244.3-201ENST00000605614 388 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 AL359314.1-201ENST00000616913 261 ntBASIC1.9□□□□□ -2.11
AP3B1O00203 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.9□□□□□ -2.11
AP3B1O00203 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
AP3B1O00203 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 RNU6-546P-201ENST00000383991 107 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 RNU2-32P-201ENST00000411193 191 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 SNORD56-201ENST00000413522 71 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 UBE2V1P10-201ENST00000414685 269 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 AC016831.2-201ENST00000417179 352 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
AP3B1O00203 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.89□□□□□ -2.11
AP3B1O00203 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.89□□□□□ -2.11
AP3B1O00203 MTND1P32-201ENST00000433043 938 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 AC091951.3-201ENST00000504093 246 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
AP3B1O00203 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.89□□□□□ -2.11
AP3B1O00203 HSPE1P23-201ENST00000509838 286 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.89□□□□□ -2.11
AP3B1O00203 SNORA31.23-201ENST00000517219 133 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 AP004607.1-201ENST00000524456 203 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 AC011979.2-201ENST00000527568 352 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.89□□□□□ -2.11
AP3B1O00203 MIR4648-201ENST00000580107 72 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.89□□□□□ -2.11
AP3B1O00203 AC108747.1-201ENST00000609508 535 ntBASIC1.89□□□□□ -2.11
AP3B1O00203 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
AP3B1O00203 RNU5E-6P-201ENST00000365574 115 ntBASIC1.88□□□□□ -2.11
AP3B1O00203 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
AP3B1O00203 RN7SKP284-201ENST00000411002 343 ntBASIC1.88□□□□□ -2.11
AP3B1O00203 AL365338.1-201ENST00000422282 858 ntBASIC1.88□□□□□ -2.11
AP3B1O00203 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.88□□□□□ -2.11
AP3B1O00203 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.88□□□□□ -2.11
AP3B1O00203 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.88□□□□□ -2.11
AP3B1O00203 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.88□□□□□ -2.11
AP3B1O00203 RNA5SP57-201ENST00000459463 123 ntBASIC1.88□□□□□ -2.11
AP3B1O00203 AC087884.1-201ENST00000469738 328 ntBASIC1.88□□□□□ -2.11
AP3B1O00203 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms