Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR496-201ENST00000385226 102 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 U3.20-201ENST00000390909 217 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 AL512844.2-201ENST00000433990 593 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 RN7SKP277-201ENST00000516895 283 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC099677.1-201ENST00000420575 175 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 AP001025.1-201ENST00000486139 332 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC099513.1-201ENST00000490423 301 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC093677.1-201ENST00000514414 678 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 RNU6-1097P-201ENST00000363586 107 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC008562.1-201ENST00000521763 330 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 MIR4661-201ENST00000582720 75 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AL592221.1-201ENST00000605266 382 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 RNU4-5P-201ENST00000607255 135 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC022202.1-201ENST00000613515 211 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC090517.2-201ENST00000614966 680 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 uc_338.34-201ENST00000617467 174 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC016716.1-201ENST00000265882 708 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 Y_RNA.78-201ENST00000362970 110 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
COL6A5A8TX70 SNORA32.3-201ENST00000384772 121 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 MIR10B-201ENST00000385011 110 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 U3.29-201ENST00000391296 212 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.16□□□□□ -2.38
COL6A5A8TX70 BX248409.1-201ENST00000455497 255 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC108157.1-201ENST00000510511 539 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 RNU5F-8P-201ENST00000515941 111 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 SNORA48.10-201ENST00000516965 160 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 SCARNA11.3-201ENST00000517276 130 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC034114.1-201ENST00000520293 285 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 OR8K2P-201ENST00000524645 927 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC010186.2-204ENST00000537668 439 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 FAM60CP-201ENST00000591086 664 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC025588.2-201ENST00000604851 466 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.16□□□□□ -2.38
COL6A5A8TX70 AC092192.1-201ENST00000633154 1018 ntBASIC0.16□□□□□ -2.38
COL6A5A8TX70 Y_RNA.67-201ENST00000362870 100 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 RNU6-10P-201ENST00000384036 107 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 RNU6-15P-201ENST00000384534 107 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 Y_RNA.551-201ENST00000384661 102 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AL136372.1-201ENST00000403060 228 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 AL109913.1-201ENST00000421173 514 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 MTCYBP34-201ENST00000439552 670 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 RPL21P47-201ENST00000483696 477 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC034236.3-201ENST00000605999 461 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AL021879.1-201ENST00000611756 288 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 SNORA4.1-201ENST00000364263 144 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 RNU6-272P-201ENST00000411028 104 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AL365496.1-201ENST00000426885 215 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC007751.1-201ENST00000529260 376 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 AC008147.4-201ENST00000617570 1204 ntBASIC0.15□□□□□ -2.39
COL6A5A8TX70 SNORD18A-201ENST00000363753 72 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 Y_RNA.421-201ENST00000384052 101 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 MIR30A-201ENST00000385092 71 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
COL6A5A8TX70 USP9YP18-201ENST00000425912 695 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC104417.1-201ENST00000523974 751 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AL590705.4-201ENST00000532209 134 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC016256.1-201ENST00000547971 354 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC092474.3-201ENST00000603022 568 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC099842.1-201ENST00000619919 596 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AL356421.1-201ENST00000403255 413 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC244023.1-201ENST00000426884 112 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 OR52A4P-202ENST00000481634 799 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 RN7SKP5-201ENST00000517045 272 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC242498.1-201ENST00000604134 111 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.14□□□□□ -2.39
COL6A5A8TX70 AC243994.1-201ENST00000618627 109 ntBASIC0.14□□□□□ -2.39
COL6A5A8TX70 SNORA25.3-201ENST00000363205 127 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 SNORA63D-201ENST00000364359 132 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 MT-TQ-201ENST00000387372 72 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.13□□□□□ -2.39
COL6A5A8TX70 AC114982.1-201ENST00000469402 321 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AC002350.1-201ENST00000490759 375 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms