Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 AL132857.1-201ENST00000555180 708 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 SUB1P4-201ENST00000566062 339 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 SNORD114-16-201ENST00000363044 70 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 RNU4-45P-201ENST00000365469 141 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 RNU6-14P-201ENST00000384630 106 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AC063976.4-201ENST00000421971 163 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 SNX2P2-201ENST00000424553 323 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 VPS26AP1-201ENST00000483197 979 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AC091435.1-201ENST00000505442 584 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 SNORD19.2-201ENST00000516978 73 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AL121579.1-201ENST00000555129 305 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AC015688.2-201ENST00000584523 262 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 BNIP3P23-201ENST00000599655 511 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AL022067.1-201ENST00000602426 454 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 Z98751.3-201ENST00000604447 521 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AC009237.15-201ENST00000610252 501 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 AC092106.3-201ENST00000611308 722 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 MIR6504-201ENST00000613520 61 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 OR5AK4P-201ENST00000635912 903 ntBASIC-0.14□□□□□ -2.43
LINC01549A6NIU2 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 SNORD89-201ENST00000390981 114 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 RNA5SP193-201ENST00000410353 107 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 RPS3AP37-201ENST00000419176 745 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 MTND4P20-201ENST00000424125 869 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 PTGES3P4-201ENST00000426243 356 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 AC104806.1-201ENST00000508720 308 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 RNA5SP503-201ENST00000517047 117 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 AC022616.2-201ENST00000523185 300 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 ADAM3B-201ENST00000569937 840 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 AC110491.1-201ENST00000562191 2010 ntBASIC-0.15□□□□□ -2.43
LINC01549A6NIU2 Z75746.1-201ENST00000440243 2080 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 SNORD114-22-201ENST00000365423 72 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 MIR1276-201ENST00000408707 83 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 AC118282.2-201ENST00000508739 374 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 RNU6-991P-201ENST00000516168 107 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 NACAP3-201ENST00000552100 481 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 AC124947.2-202ENST00000552735 133 ntBASIC-0.16□□□□□ -2.44
LINC01549A6NIU2 SNORD12-201ENST00000391002 90 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 RNA5SP511-201ENST00000410487 115 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 ISCA1P6-201ENST00000427740 390 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 RPL31P35-201ENST00000431058 377 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 FTH1P12-201ENST00000432137 551 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 TIMM9P1-201ENST00000436122 256 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC073614.1-201ENST00000438690 650 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC004865.1-201ENST00000442276 1003 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC023512.1-201ENST00000444513 499 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 RPL23AP35-201ENST00000451906 501 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 MTATP6P9-201ENST00000515039 680 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 MIR3664-201ENST00000579074 99 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC068790.6-201ENST00000602558 258 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC091057.3-201ENST00000602684 733 ntBASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
LINC01549A6NIU2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 RNU6-884P-201ENST00000363889 107 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AC002429.1-201ENST00000437672 148 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 ATP5J2P3-201ENST00000451550 258 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AC111193.1-201ENST00000504097 155 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 CYCTP-201ENST00000504253 315 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 MIR4431-201ENST00000579990 94 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AC091805.2-201ENST00000603848 235 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AL356157.2-201ENST00000605122 111 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AC006270.3-201ENST00000605967 1036 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AC016542.1-201ENST00000608259 493 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.18□□□□□ -2.44
LINC01549A6NIU2 AL359740.1-201ENST00000624340 592 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms