Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC113618.1-201ENST00000416747 285 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC245291.1-201ENST00000419501 328 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC098614.2-201ENST00000426040 255 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AL512844.2-201ENST00000433990 593 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 RPL23AP50-201ENST00000434149 455 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AL031274.1-201ENST00000450334 232 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC092798.1-201ENST00000458542 409 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 SNORA25.10-201ENST00000515926 124 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 RNA5SP208-201ENST00000516156 78 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC008121.3-201ENST00000618726 433 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 AC091925.1-201ENST00000623204 462 ntBASIC3.98□□□□□ -1.77
CCDC66A2RUB6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC66A2RUB6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 RNU1-64P-201ENST00000365443 163 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 RNU6-140P-201ENST00000384566 108 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 RPL21P65-201ENST00000406094 466 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AC243428.1-201ENST00000421099 264 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AC093151.1-201ENST00000427711 313 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 SETP5-201ENST00000437270 562 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 MTND3P2-201ENST00000438452 342 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 SNORA71B-202ENST00000439232 272 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 MTND5P22-201ENST00000458380 195 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 ACA59.1-201ENST00000515966 143 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 RNU6-1282P-201ENST00000516735 96 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 RNU6-264P-201ENST00000517134 104 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 Y_RNA.720-201ENST00000517166 92 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AC023442.1-201ENST00000531247 422 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 HMGB1P14-201ENST00000557424 591 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AC008121.1-201ENST00000603244 268 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AC007485.1-201ENST00000616755 206 ntBASIC3.97□□□□□ -1.77
CCDC66A2RUB6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC66A2RUB6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 Y_RNA.158-201ENST00000363651 101 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 MRPL42P3-201ENST00000401492 326 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 RNU6-174P-201ENST00000410406 106 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 RNA5SP31-201ENST00000411144 127 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 AC008267.5-201ENST00000424928 265 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 RPS15AP10-201ENST00000432472 382 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 AC092573.2-201ENST00000434546 243 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 AC009969.1-201ENST00000438726 172 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 HMGN2P16-201ENST00000456802 261 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 RPL23AP45-201ENST00000476406 468 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 AL135752.1-201ENST00000479477 471 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 CPDP1-201ENST00000579660 283 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 MIR4680-201ENST00000580906 66 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 AC006157.1-201ENST00000611750 366 ntBASIC3.96□□□□□ -1.78
CCDC66A2RUB6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC66A2RUB6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 MTND5P16-201ENST00000460269 1703 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 MAPK10-362ENST00000641864 4484 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 MIR372-201ENST00000362225 67 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 RNA5SP383-201ENST00000362934 120 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 Y_RNA.364-201ENST00000365532 101 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 Y_RNA.428-201ENST00000384078 102 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 RNU6-217P-201ENST00000384164 104 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 RNY1P14-201ENST00000384426 108 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AC096664.2-201ENST00000411843 406 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AC006946.1-201ENST00000429106 328 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AL117339.2-201ENST00000430475 180 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AL159987.2-201ENST00000432754 307 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AL160004.2-201ENST00000432935 350 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AC011816.1-201ENST00000441346 546 ntBASIC3.95□□□□□ -1.78
CCDC66A2RUB6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC66A2RUB6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms