Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC004944.1-201ENST00000517807 3059 ntBASIC3.14□□□□□ -1.91
CCDC196A0A1B0GTZ2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL354685.2-201ENST00000448218 1447 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 SNORD14B-201ENST00000364533 90 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU6-1303P-201ENST00000364841 107 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 SNORD70.1-201ENST00000391007 85 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL360182.1-201ENST00000397433 468 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 TOMM20P4-201ENST00000427861 435 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 C8orf59P1-201ENST00000429930 303 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL627311.1-201ENST00000431514 115 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 SCARNA18-201ENST00000459004 134 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL163973.1-201ENST00000484753 577 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 GZMAP1-201ENST00000503054 631 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU1-86P-201ENST00000516108 154 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU1-107P-201ENST00000516617 154 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC104383.1-201ENST00000530297 370 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC079600.2-201ENST00000550076 130 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC007151.1-201ENST00000572774 483 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC007621.1-201ENST00000604544 437 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
CCDC196A0A1B0GTZ2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU6-858P-201ENST00000362436 107 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 Y_RNA.255-201ENST00000364581 97 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 Y_RNA.516-201ENST00000384541 124 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU6-19P-201ENST00000384718 107 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 MIR147B-201ENST00000390185 80 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL590002.1-201ENST00000406554 418 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL513477.1-202ENST00000417061 214 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC016691.1-201ENST00000441321 413 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC116655.1-201ENST00000508324 901 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 SNORA40.12-201ENST00000516329 111 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 SNORA31.15-201ENST00000516771 132 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AP001330.5-201ENST00000607176 411 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC093788.1-201ENST00000609356 927 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 MIR6134-201ENST00000617606 109 ntBASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC196A0A1B0GTZ2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC004520.1-201ENST00000608362 1413 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU6-1322P-201ENST00000364309 107 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU6-384P-201ENST00000364900 104 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 SNORA69-201ENST00000383895 132 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU6-393P-201ENST00000384475 107 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 MIR518D-201ENST00000385014 87 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 MIR34A-201ENST00000385130 110 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL606923.1-201ENST00000406616 190 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNU2-25P-201ENST00000411041 191 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC096649.2-201ENST00000416186 393 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AL669831.1-202ENST00000428504 417 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 GTF2IP13-201ENST00000438487 386 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AP000852.1-201ENST00000472460 573 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 HMGB1P30-201ENST00000492455 606 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC113155.1-201ENST00000511141 769 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 AC114781.4-201ENST00000513707 639 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 RNA5SP401-201ENST00000515920 127 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 MIR892C-201ENST00000516410 77 ntBASIC3.11□□□□□ -1.91
CCDC196A0A1B0GTZ2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms