Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL731537.2-201ENST00000561565 951 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AC023813.2-201ENST00000564321 469 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AC126365.2-201ENST00000580630 379 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AC060771.1-201ENST00000582031 164 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 BNIP3P27-201ENST00000599991 412 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 uc_338.15-201ENST00000615470 191 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AP000676.3-201ENST00000623299 569 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AC093875.1-201ENST00000623688 504 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 ZNF72P-201ENST00000425869 1908 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 AC233981.2-201ENST00000611524 1614 ntBASIC0.97□□□□□ -2.25
TRAV4A0A0B4J268 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-271P-201ENST00000363858 105 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-609P-201ENST00000365459 107 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-468P-201ENST00000384003 109 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC068533.2-201ENST00000411872 306 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 MRPS36P1-201ENST00000421291 307 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 FO393414.1-201ENST00000428697 1184 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC015922.2-201ENST00000435593 184 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AP000949.1-201ENST00000438328 629 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 MTCO1P44-201ENST00000441935 243 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 RPF2P2-201ENST00000504693 896 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 RNVU1-2-201ENST00000516326 135 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC104417.1-201ENST00000523974 751 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 COPS8P3-201ENST00000526024 482 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AL161670.1-201ENST00000554348 137 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 VN1R83P-201ENST00000595685 445 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 VN1R87P-201ENST00000596706 487 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AP001981.2-201ENST00000603241 418 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC093788.1-201ENST00000609356 927 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC078880.5-201ENST00000617845 421 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AL121890.5-201ENST00000620848 304 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 HAUS6P2-201ENST00000433254 2404 ntBASIC0.96□□□□□ -2.26
TRAV4A0A0B4J268 AC091812.1-201ENST00000432235 1948 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 Y_RNA.99-201ENST00000363138 105 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-529P-201ENST00000363383 104 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-236P-201ENST00000363886 106 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 MIR618-201ENST00000385287 98 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 FTH1P15-201ENST00000406984 280 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AL590084.1-201ENST00000407885 387 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC012308.1-201ENST00000451232 178 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC093801.2-201ENST00000503966 1050 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC024589.1-201ENST00000512207 263 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 SNORA31.17-201ENST00000516953 127 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 RPL21P5-201ENST00000554662 472 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC019288.1-201ENST00000557918 224 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC005668.1-201ENST00000571142 476 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC012065.4-201ENST00000602445 679 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC098483.2-201ENST00000603158 454 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 BNIP3P9-201ENST00000603714 553 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 Z82243.1-201ENST00000609432 473 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 AC006338.1-201ENST00000618453 749 ntBASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV4A0A0B4J268 FARSBP1-201ENST00000435808 1778 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 RNU1-17P-201ENST00000363022 152 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AL591806.2-201ENST00000433122 173 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 RPL23AP76-201ENST00000441860 458 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AL035666.1-201ENST00000446195 348 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AL353718.1-201ENST00000451028 517 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 RNU1-123P-201ENST00000458950 160 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 RNU6-150P-201ENST00000516237 95 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AC009902.1-201ENST00000519351 183 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AP004247.1-201ENST00000531556 1289 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 MTATP6P25-201ENST00000574491 261 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 MIR3912-201ENST00000577566 105 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AP001542.1-201ENST00000591314 200 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AL050343.2-201ENST00000607338 280 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AC012360.2-201ENST00000609349 391 ntBASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV4A0A0B4J268 AC021755.4-201ENST00000616620 456 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms