Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC005786.1-201ENST00000588553 154 ntBASIC0.39□□□□□ -2.35
TRAV30A0A087WSZ9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV30A0A087WSZ9 MZT1P2-201ENST00000604387 248 ntBASIC0.39□□□□□ -2.35
TRAV30A0A087WSZ9 Z82243.1-201ENST00000609432 473 ntBASIC0.39□□□□□ -2.35
TRAV30A0A087WSZ9 AL159972.1-201ENST00000625150 448 ntBASIC0.39□□□□□ -2.35
TRAV30A0A087WSZ9 SEC63P2-201ENST00000503863 1939 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 RPL23AP32-201ENST00000395315 459 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 RPS26P5-201ENST00000418544 335 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 CBX3P6-201ENST00000430257 527 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 SNRPEP7-201ENST00000438350 220 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 FABP5P5-201ENST00000515537 406 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 DEFB108E-201ENST00000524692 240 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AL512310.8-201ENST00000550183 120 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AC002545.1-201ENST00000592511 181 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 VN1R88P-201ENST00000596787 292 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AL583856.2-201ENST00000606298 543 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AL590396.2-201ENST00000636511 1041 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AC100821.1-201ENST00000523153 2479 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 AL442644.1-201ENST00000454390 3105 ntBASIC0.38□□□□□ -2.35
TRAV30A0A087WSZ9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AC138393.1-203ENST00000327086 343 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 RNA5SP347-201ENST00000362445 119 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 RPL31P54-201ENST00000429803 370 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 MOB1AP2-201ENST00000446060 614 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AL160314.1-201ENST00000490836 438 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 RNU4-54P-201ENST00000516428 129 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AC004805.2-201ENST00000605382 482 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AC090970.3-201ENST00000612566 866 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 AC083806.3-201ENST00000614016 455 ntBASIC0.37□□□□□ -2.35
TRAV30A0A087WSZ9 RNU6-707P-201ENST00000364647 95 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 MIR19B1-201ENST00000384829 87 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 MIR1276-201ENST00000408707 83 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 FTH1P12-201ENST00000432137 551 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 UBE2V1P8-201ENST00000437166 265 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 OR2AQ1P-201ENST00000451972 200 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 MTND1P16-201ENST00000465177 898 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 ATP5EP1-201ENST00000510257 156 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 RN7SKP88-201ENST00000516847 250 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 ARL2BPP5-201ENST00000523141 481 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 AC011604.1-201ENST00000545978 196 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 AP001429.1-201ENST00000602568 530 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 7SK.8-201ENST00000612110 250 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 MIR6504-201ENST00000613520 61 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 AC040896.1-201ENST00000613819 479 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 7SK.11-201ENST00000615477 250 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 7SK.13-201ENST00000622040 250 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 AC008993.2-201ENST00000631744 806 ntBASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV30A0A087WSZ9 SNORD114-24-201ENST00000365029 72 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 CCNG1P1-201ENST00000406783 885 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC092634.6-201ENST00000418558 192 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 FAM204CP-201ENST00000424489 642 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC090142.3-201ENST00000519012 385 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 TRAV32-201ENST00000553993 340 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC096772.1-201ENST00000609146 564 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 AC095038.3-201ENST00000634439 195 ntBASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV30A0A087WSZ9 RNU6-942P-201ENST00000363002 107 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 RNU2-32P-201ENST00000411193 191 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 AL161935.2-201ENST00000414627 60 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 RPS15AP9-201ENST00000439856 381 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 AC002381.1-201ENST00000447049 280 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms