Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 CBX3P8-201ENST00000532412 525 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 TVP23BP1-201ENST00000557500 617 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 BNIP3P22-201ENST00000593399 556 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 AC233981.2-201ENST00000611524 1614 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 AL109809.4-201ENST00000603520 2185 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 AP000560.1-201ENST00000624150 1937 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU6-595P-201ENST00000363944 107 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RNA5SP242-201ENST00000364171 118 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU6-283P-201ENST00000364788 107 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU6-700P-201ENST00000391043 107 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 U3.22-201ENST00000391120 215 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 HMGN2P31-201ENST00000432430 273 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AC099799.1-201ENST00000439809 192 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RPS29P12-201ENST00000460178 152 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AP001324.2-201ENST00000461163 319 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL31P41-201ENST00000477967 372 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AC110768.1-201ENST00000509222 400 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 AC090877.1-201ENST00000561418 344 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL23AP78-201ENST00000599928 470 ntBASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.28□□□□□ -1.56
GTF3C3Q9Y5Q9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 ZNF826P-207ENST00000622273 1910 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR331-201ENST00000362302 94 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 SNORD35B-201ENST00000363660 87 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.394-201ENST00000383942 103 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-968P-201ENST00000384076 107 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.533-201ENST00000384596 114 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR143-201ENST00000385300 106 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 AL133475.1-201ENST00000404414 305 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 MTCYBP2-201ENST00000407745 171 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 SNORA57.3-201ENST00000411095 141 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 CYCSP48-201ENST00000417124 323 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 AC244670.1-201ENST00000436879 112 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR2053-201ENST00000459295 91 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 AC090096.1-201ENST00000489168 390 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 RPL7P51-201ENST00000490532 749 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 RN7SKP147-201ENST00000517154 244 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 SCARNA11.3-201ENST00000517276 130 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 AL359854.1-201ENST00000614203 1594 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 AL049781.1-201ENST00000623195 3585 ntBASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.27□□□□□ -1.57
GTF3C3Q9Y5Q9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 MAPK10-362ENST00000641864 4484 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.112-201ENST00000363250 102 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.138-201ENST00000363462 102 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.428-201ENST00000384078 102 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 SAR1AP2-201ENST00000392696 594 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AL512633.1-201ENST00000399931 655 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AL590004.1-201ENST00000405321 300 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AL132765.1-201ENST00000434165 553 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 SEM1P1-201ENST00000506694 209 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 AC137590.2-201ENST00000619709 240 ntBASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
GTF3C3Q9Y5Q9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR323A-201ENST00000362199 86 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.48-201ENST00000362710 103 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AP002088.1-201ENST00000382740 395 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MTCYBP10-201ENST00000424905 650 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AL157831.1-201ENST00000426134 473 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MTCYBP6-201ENST00000441810 138 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 GPM6BP3-201ENST00000442797 145 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AC079354.2-201ENST00000453523 154 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MTND4LP22-201ENST00000508209 276 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 RNA5SP362-201ENST00000516048 118 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AP000889.1-201ENST00000530968 660 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AL590705.4-201ENST00000532209 134 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms