Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB3Q9Y5E6 AC073073.2-201ENST00000609827 2578 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 SNORA17.1-201ENST00000362945 126 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-1205P-201ENST00000363625 106 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 U3.9-201ENST00000363823 204 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-1164P-201ENST00000364428 107 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-1264P-201ENST00000383891 107 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AL357515.1-201ENST00000402967 542 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AL031003.1-201ENST00000404229 172 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 U3.36-201ENST00000408418 213 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 MIR1290-201ENST00000408735 78 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-710P-201ENST00000410424 105 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 RN7SKP216-201ENST00000411050 312 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AL592437.2-201ENST00000421655 2434 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 MARK2P15-201ENST00000432204 2186 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AC244670.1-201ENST00000436879 112 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 HMGB1P37-201ENST00000439613 609 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AC092754.1-201ENST00000472975 479 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 RNU6-1061P-201ENST00000516530 99 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AC006199.1-201ENST00000548728 219 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AL161713.1-201ENST00000555538 145 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AL162431.4-201ENST00000604674 411 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 MIR6748-201ENST00000610433 71 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 AC104260.2-201ENST00000623551 3497 ntBASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB3Q9Y5E6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 RNU1-62P-201ENST00000362599 164 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 SNORD115-30-201ENST00000364117 82 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 RNA5SP235-201ENST00000365411 114 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 SNORA12.1-201ENST00000390873 148 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 SNORA26.3-201ENST00000391119 136 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 AL512604.1-201ENST00000404812 257 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 RNU4-43P-201ENST00000410628 137 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 FAR2P2-201ENST00000413041 594 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 AC009237.8-201ENST00000445492 379 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 AC053481.4-201ENST00000583164 216 ntBASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
PCDHB3Q9Y5E6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHB3Q9Y5E6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.09□□□□□ -1.6
PCDHB3Q9Y5E6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.368-201ENST00000365547 113 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6-597P-201ENST00000365620 102 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AC068538.1-201ENST00000376856 336 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 RNY4P29-201ENST00000410801 97 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.692-201ENST00000516627 105 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AC092490.3-201ENST00000545370 572 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 CR383656.8-201ENST00000549046 145 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MIR4436B2-201ENST00000581415 91 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MIR4436B1-201ENST00000583272 91 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MIR3936-201ENST00000584304 110 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MIR6820-201ENST00000611508 62 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 uc_338.28-201ENST00000612082 187 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AC100827.5-201ENST00000615883 426 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AL133383.2-201ENST00000622958 2336 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AC112198.2-201ENST00000426589 6996 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
PCDHB3Q9Y5E6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms