Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC116337.1-201ENST00000509680 687 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC104136.1-201ENST00000512969 394 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 GMPSP1-201ENST00000514075 579 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RN7SKP83-201ENST00000516512 178 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-579P-201ENST00000516879 102 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RN7SKP258-201ENST00000517151 304 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RNU1-54P-201ENST00000517181 120 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC009902.1-201ENST00000519351 183 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 CYCSP27-201ENST00000527643 293 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC006557.5-201ENST00000603126 811 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL160281.1-201ENST00000605307 311 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC099778.2-201ENST00000610904 211 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC083806.3-201ENST00000614016 455 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC068831.7-201ENST00000616954 363 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AC022418.1-201ENST00000624118 445 ntBASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.04□□□□□ -1.76
CTDP1Q9Y5B0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 SNORD3E-201ENST00000362899 217 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-76P-201ENST00000384060 104 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 RNU6-1105P-201ENST00000384774 107 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AL590632.1-201ENST00000424289 371 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 HMGB1P27-201ENST00000431429 603 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AL035666.1-201ENST00000446195 348 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 RN7SL807P-201ENST00000470923 297 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC097473.1-201ENST00000508142 408 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC007938.3-201ENST00000604965 623 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AC106900.2-201ENST00000604994 317 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 AL132822.1-201ENST00000617063 513 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 7SK.10-201ENST00000621414 298 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 ZNF826P-207ENST00000622273 1910 ntBASIC4.03□□□□□ -1.76
CTDP1Q9Y5B0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CTDP1Q9Y5B0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-1309P-201ENST00000363305 108 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 Y_RNA.133-201ENST00000363428 110 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 Y_RNA.148-201ENST00000363557 117 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 U3.39-201ENST00000408569 239 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 RNA5SP120-201ENST00000410900 112 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 YPEL5P1-201ENST00000419731 367 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 RPL7P37-201ENST00000425095 738 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC008264.1-201ENST00000447612 367 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 RPL37P6-201ENST00000460682 294 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 RPL23AP14-201ENST00000468281 468 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC087884.1-201ENST00000469738 328 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC026801.1-201ENST00000497178 464 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 MLLT10P2-201ENST00000506434 249 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 FCF1P8-201ENST00000510322 597 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 Y_RNA.708-201ENST00000516950 96 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC026371.1-201ENST00000551867 419 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 AC010205.1-201ENST00000616668 449 ntBASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDP1Q9Y5B0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 Y_RNA.5-201ENST00000362334 102 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-1115P-201ENST00000362490 106 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-890P-201ENST00000384121 107 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-45P-201ENST00000384471 107 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-1050P-201ENST00000410388 107 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 RPS12P24-201ENST00000412619 387 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AL358176.2-201ENST00000425769 204 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AC006989.1-201ENST00000427212 131 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AC008155.2-201ENST00000464337 397 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 SNORA31.22-201ENST00000517204 135 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AC087854.1-201ENST00000519706 414 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 ERHP1-201ENST00000523006 310 ntBASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDP1Q9Y5B0 AC025423.5-201ENST00000550230 219 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms