Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC026464.5-201ENST00000562497 722 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AL022345.1-201ENST00000607292 135 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 MIR7112-201ENST00000616126 65 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC006111.3-201ENST00000622137 383 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
PKP3Q9Y446 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 RNU6-254P-201ENST00000363377 107 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 SNORA38.1-201ENST00000364172 131 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 SNORD14B-201ENST00000364533 90 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 Y_RNA.263-201ENST00000364659 114 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 RNU6-166P-201ENST00000384371 107 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 RNU2-3P-201ENST00000410144 191 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 RNA5SP38-201ENST00000410750 119 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 AL592148.1-201ENST00000413568 445 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 CYCSP33-201ENST00000414485 327 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 TOMM20P4-201ENST00000427861 435 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 AL627311.1-201ENST00000431514 115 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 MTND1P11-201ENST00000456661 876 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 AC092798.1-201ENST00000458542 409 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 AC008549.1-201ENST00000512900 643 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 SNORA25.17-201ENST00000517184 124 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 RNU6-323P-201ENST00000521915 107 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 MIR4782-201ENST00000577987 79 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 FGF7P1-201ENST00000582820 288 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 MIR5692C1-201ENST00000585309 91 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.15□□□□□ -1.91
PKP3Q9Y446 U2.21-201ENST00000637295 81 ntBASIC3.15□□□□□ -1.91
PKP3Q9Y446 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKP3Q9Y446 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKP3Q9Y446 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKP3Q9Y446 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU6-778P-201ENST00000363269 103 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 Y_RNA.324-201ENST00000365165 102 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU1-73P-201ENST00000383971 164 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU6-658P-201ENST00000384606 106 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 MIR450B-201ENST00000401182 78 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AL356432.1-201ENST00000405809 419 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKP3Q9Y446 AL353729.1-201ENST00000425044 720 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 MRPL50P4-201ENST00000446432 475 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 MTATP6P7-201ENST00000453315 681 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 AC103851.1-201ENST00000506833 274 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU1-143P-201ENST00000516296 146 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU6-256P-201ENST00000516747 97 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU6-703P-201ENST00000516946 107 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AP000889.2-201ENST00000532684 490 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 MIR3942-201ENST00000585264 109 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.14□□□□□ -1.91
PKP3Q9Y446 AC243960.4-201ENST00000600532 288 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 U1.23-201ENST00000610293 146 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNU1-68P-201ENST00000615382 146 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AL138880.2-201ENST00000616214 239 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AC104985.2-201ENST00000620598 500 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 U1.39-201ENST00000621562 146 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
PKP3Q9Y446 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKP3Q9Y446 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKP3Q9Y446 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP3Q9Y446 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKP3Q9Y446 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKP3Q9Y446 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
PKP3Q9Y446 SNORD46.1-201ENST00000364139 104 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 RNU6-384P-201ENST00000364900 104 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 MIR10A-201ENST00000385043 110 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 MIR34A-201ENST00000385130 110 ntBASIC3.13□□□□□ -1.91
PKP3Q9Y446 MT-TD-201ENST00000387419 68 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms