Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 AP001273.1-201ENST00000624493 3152 ntBASIC4.96□□□□□ -1.62
RTCBQ9Y3I0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 RNU1-15P-201ENST00000353977 144 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 SNORD50.1-201ENST00000362987 71 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 RNY1-201ENST00000364228 113 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 U3.13-201ENST00000364804 214 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 MIR215-201ENST00000384858 110 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 SNORD58.1-201ENST00000391313 66 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 AL513124.1-201ENST00000450410 614 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 AL049874.1-201ENST00000489560 388 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 Y_RNA.713-201ENST00000517013 96 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 AL590705.4-201ENST00000532209 134 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 AC011471.1-201ENST00000585766 187 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 AC009318.2-201ENST00000610917 651 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 AC004792.1-201ENST00000614523 137 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTCBQ9Y3I0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 SCN1A-220ENST00000641603 12506 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 Y_RNA.270-201ENST00000364693 104 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 Y_RNA.297-201ENST00000364950 91 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 MIR195-201ENST00000385194 87 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 SNORD115-46-201ENST00000390982 71 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 Z92545.1-201ENST00000411782 234 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 CYCSP35-201ENST00000451978 304 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 IFNWP4-201ENST00000453148 294 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 RN7SKP210-201ENST00000459176 261 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 RPS26P28-201ENST00000470806 348 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 RPL23AP45-201ENST00000476406 468 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC087190.1-201ENST00000484462 480 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC107032.1-201ENST00000485945 480 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 RNU4-71P-201ENST00000516258 113 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 RNU4-60P-201ENST00000517239 135 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 RPL21P7-201ENST00000557463 483 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 AC244505.7-201ENST00000599675 272 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 BMS1P21-201ENST00000634565 365 ntBASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RTCBQ9Y3I0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 OR4G2P-202ENST00000641004 1759 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 snoU2_19.2-201ENST00000363024 80 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 Y_RNA.150-201ENST00000363562 102 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 MIR218-2-201ENST00000385006 110 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 MIR514A1-201ENST00000385133 98 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AL603910.2-201ENST00000407268 136 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 MIR1251-201ENST00000408552 70 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AP000275.1-201ENST00000411943 390 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AL117339.3-201ENST00000418733 162 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AC104332.1-201ENST00000440471 797 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 DEFB108E-201ENST00000524692 240 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AL442163.3-201ENST00000554110 156 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AC103996.1-201ENST00000555468 102 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AL360181.4-201ENST00000621752 134 ntBASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RTCBQ9Y3I0 AL365440.1-201ENST00000436135 2167 ntBASIC4.92□□□□□ -1.62
RTCBQ9Y3I0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.92□□□□□ -1.62
RTCBQ9Y3I0 AC092435.4-201ENST00000623012 4159 ntBASIC4.92□□□□□ -1.62
RTCBQ9Y3I0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RTCBQ9Y3I0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.92□□□□□ -1.62
RTCBQ9Y3I0 AL139811.1-201ENST00000424779 2299 ntBASIC4.92□□□□□ -1.62
RTCBQ9Y3I0 Y_RNA.54-201ENST00000362766 105 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms