Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 FCF1P6-201ENST00000456841 595 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RPL39P36-201ENST00000490784 156 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-667P-201ENST00000517186 102 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RPS3AP4-201ENST00000555161 764 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC090970.3-201ENST00000612566 866 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 MIR6715A-201ENST00000615929 79 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC126544.2-201ENST00000625174 749 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.34□□□□□ -2.2
HDGFL3Q9Y3E1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HDGFL3Q9Y3E1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 RNU1-57P-201ENST00000384491 166 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 MIR29C-201ENST00000385231 88 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC008267.5-201ENST00000424928 265 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AL592045.1-201ENST00000429867 352 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 FO393415.2-201ENST00000480085 343 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 RNU6-572P-201ENST00000516724 80 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 DUXAP5-201ENST00000529668 529 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 LRRC6P1-201ENST00000532188 885 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 IMMP1LP2-201ENST00000552954 492 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 MTCYBP23-201ENST00000558717 1102 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC103987.3-201ENST00000582071 292 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 RPL30P11-203ENST00000598995 310 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AL358072.1-201ENST00000604156 575 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC025754.2-201ENST00000606491 432 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AL391813.2-201ENST00000609113 322 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC096772.1-201ENST00000609146 564 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC084824.5-201ENST00000612009 413 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AL353997.5-201ENST00000618886 171 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 AC092192.1-201ENST00000633154 1018 ntBASIC1.33□□□□□ -2.2
HDGFL3Q9Y3E1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 RNU6-817P-201ENST00000391083 104 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 RN7SKP266-201ENST00000410232 287 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 BTF3P15-201ENST00000455606 336 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 RNU6-586P-201ENST00000517265 104 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 AL356432.3-201ENST00000568952 465 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 MIR4524B-201ENST00000581569 115 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 BNIP3P9-201ENST00000603714 553 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 AC092574.1-201ENST00000609771 420 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 AL136313.1-201ENST00000624804 202 ntBASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HDGFL3Q9Y3E1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC068050.1-201ENST00000394891 380 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 MTND1P16-201ENST00000465177 898 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC021146.8-201ENST00000507455 733 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC079395.1-201ENST00000510981 262 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 MTCYBP43-201ENST00000513621 740 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 RNU6-143P-201ENST00000516942 93 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AL354943.1-201ENST00000572103 781 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC018638.7-201ENST00000605836 1114 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC098614.4-201ENST00000607601 462 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC245297.2-201ENST00000610119 565 ntBASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HDGFL3Q9Y3E1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 MIR126-201ENST00000362291 85 ntBASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 SNORD114-19-201ENST00000363072 75 ntBASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 SNORA40C-201ENST00000391285 128 ntBASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 FTH1P15-201ENST00000406984 280 ntBASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 MIR1262-201ENST00000408276 93 ntBASIC1.3□□□□□ -2.2
HDGFL3Q9Y3E1 MIR320C1-201ENST00000408566 88 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms