Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 Y_RNA.576-201ENST00000384781 102 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 ELOCP20-201ENST00000422460 345 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC006028.1-201ENST00000438379 402 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC108734.1-201ENST00000439549 399 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 RPL23AP31-201ENST00000456160 467 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 TRBV26-201ENST00000456572 344 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AP002884.2-201ENST00000471647 395 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC108860.1-201ENST00000484521 383 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 BTF3L4P4-201ENST00000506381 449 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 Y_RNA.700-201ENST00000516806 100 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 SNORD116.3-201ENST00000517176 78 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 FAM60DP-201ENST00000524174 632 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC011494.1-201ENST00000596454 237 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC008687.2-201ENST00000597865 520 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC104763.2-201ENST00000604179 382 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 HMGB1P50-201ENST00000605814 607 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 MIR486-1-201ENST00000612171 68 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 AP001282.2-201ENST00000616149 309 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC245100.2-201ENST00000454544 1679 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.55□□□□□ -2
NOTCH3Q9UM47 AC027287.1-201ENST00000553115 1453 ntBASIC2.55□□□□□ -2
NOTCH3Q9UM47 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NOTCH3Q9UM47 Y_RNA.297-201ENST00000364950 91 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU5E-6P-201ENST00000365574 115 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 Y_RNA.416-201ENST00000384014 113 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU6-842P-201ENST00000384269 107 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RPL23AP4-201ENST00000427757 463 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC117503.1-201ENST00000472241 394 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC012123.2-201ENST00000485809 248 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 MTCO3P44-201ENST00000510977 541 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU2-10P-201ENST00000516375 211 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC244205.2-202ENST00000635781 342 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.54□□□□□ -2
NOTCH3Q9UM47 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 DDX18P3-201ENST00000404856 2007 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 AL391987.6-201ENST00000305671 199 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 Y_RNA.8-201ENST00000362353 102 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU6-562P-201ENST00000362731 107 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 Y_RNA.151-201ENST00000363566 112 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU6-921P-201ENST00000384361 107 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU6-225P-201ENST00000384613 103 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 Y_RNA.562-201ENST00000384695 113 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 U3.20-201ENST00000390909 217 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU2-20P-201ENST00000410425 191 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNA5SP104-201ENST00000410989 118 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU2-14P-201ENST00000411053 191 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC063979.1-201ENST00000415539 377 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RAC1P3-201ENST00000416129 580 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RPL23AP82-202ENST00000427528 469 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 USP9YP30-201ENST00000430729 455 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 HLA-N-201ENST00000437516 135 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 NEFMP1-201ENST00000443423 1006 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 RPL23AP15-201ENST00000450202 459 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 OR2AQ1P-201ENST00000451972 200 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 CENPBD1P1-201ENST00000464061 469 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC026801.1-201ENST00000497178 464 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 RNU6-307P-201ENST00000516743 106 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 SNORD39.4-201ENST00000620099 78 ntBASIC2.54□□□□□ -2
NOTCH3Q9UM47 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.54□□□□□ -2
NOTCH3Q9UM47 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
NOTCH3Q9UM47 MIR335-201ENST00000362173 94 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 U3.11-201ENST00000364476 212 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU6-1027P-201ENST00000383998 107 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU6-886P-201ENST00000384319 105 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 Y_RNA.577-201ENST00000384794 101 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 SNORD58.1-201ENST00000391313 66 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RPLP0P7-201ENST00000416050 667 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RPL21P109-201ENST00000422213 475 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 MTCO3P29-201ENST00000432119 779 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 RPL29P29-201ENST00000448725 423 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 NDUFB1P2-201ENST00000449477 176 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC069499.1-201ENST00000489433 509 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC067942.3-201ENST00000512025 362 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU6-1332P-201ENST00000516666 104 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 RNU4-77P-201ENST00000516692 156 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 AC109479.2-201ENST00000517842 174 ntBASIC2.53□□□□□ -2
NOTCH3Q9UM47 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms