Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AL591704.1-201ENST00000432574 275 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 RPS15AP27-201ENST00000449183 343 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AP000852.1-201ENST00000472460 573 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 RPL21P99-201ENST00000480369 423 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AC098799.2-201ENST00000509466 868 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 MTND4P7-201ENST00000523876 130 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AC023050.3-201ENST00000541142 333 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 BNIP3P6-201ENST00000549284 499 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 TRAV28-201ENST00000557548 323 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 AC007785.2-201ENST00000598627 1916 ntBASIC3.68□□□□□ -1.82
HDAC9Q9UKV0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AC007496.3-201ENST00000624987 3443 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.72-201ENST00000362894 103 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.167-201ENST00000363735 109 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.615-201ENST00000410769 117 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AL669831.1-202ENST00000428504 417 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AL592045.1-201ENST00000429867 352 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AL512844.2-201ENST00000433990 593 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 GTF2IP13-201ENST00000438487 386 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 HMGB3P11-201ENST00000440127 604 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 FABP5P15-201ENST00000453566 214 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 SCARNA18-201ENST00000459004 134 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AL160314.1-201ENST00000490836 438 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AC009901.1-201ENST00000506703 541 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.702-201ENST00000516843 96 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AC100810.6-201ENST00000638068 285 ntBASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HDAC9Q9UKV0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 U3.12-201ENST00000364498 214 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 MIR504-201ENST00000385065 83 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AL139039.1-201ENST00000401900 692 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AL162578.1-201ENST00000406202 378 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 RNA5SP31-201ENST00000411144 127 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 RNA5SP111-201ENST00000411386 101 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 NUP35P1-201ENST00000422734 947 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC007919.1-201ENST00000429380 217 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC105272.1-201ENST00000438604 198 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC098614.3-201ENST00000438957 440 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 PIGFP3-201ENST00000441918 722 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 PMCHL2-203ENST00000457791 237 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 RPS29P26-201ENST00000477483 171 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 RPL21P93-201ENST00000480465 489 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 HMGN1P12-201ENST00000499125 195 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AL136221.1-201ENST00000621449 509 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 Z99571.1-201ENST00000636677 394 ntBASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.66□□□□□ -1.82
HDAC9Q9UKV0 AC099654.7-201ENST00000635788 2127 ntBASIC3.65□□□□□ -1.82
HDAC9Q9UKV0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HDAC9Q9UKV0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.65□□□□□ -1.82
HDAC9Q9UKV0 RNU6-715P-201ENST00000365204 103 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 SNORA4.3-201ENST00000365564 137 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 Y_RNA.378-201ENST00000365652 113 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 SNORA70B-201ENST00000384210 135 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 SNORA16.2-201ENST00000390991 127 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 USP9YP8-201ENST00000441913 500 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 AL135938.1-201ENST00000443141 297 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 HMGN1P18-201ENST00000457642 277 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 AL135752.1-201ENST00000479477 471 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 AC114786.4-201ENST00000508771 728 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 RNU6-1038P-201ENST00000516516 104 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 AC107016.2-201ENST00000547968 190 ntBASIC3.65□□□□□ -1.83
HDAC9Q9UKV0 MTCO3P23-201ENST00000561363 289 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms