Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 MTATP6P7-201ENST00000453315 681 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 snoU109.2-201ENST00000459316 135 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AC023141.12-201ENST00000512399 199 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 HSPE1P5-201ENST00000561489 272 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AC078899.3-201ENST00000599065 212 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 RPS29P30-201ENST00000600975 111 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 FTX_3.1-201ENST00000610451 147 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 FTLP6-201ENST00000355274 422 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 MIR372-201ENST00000362225 67 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 MIR208A-201ENST00000362287 71 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.19-201ENST00000362462 99 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.350-201ENST00000365409 98 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.562-201ENST00000384695 113 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 MIR518D-201ENST00000385014 87 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 SNORA12.2-201ENST00000391040 156 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 U3.37-201ENST00000408528 213 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AP000275.1-201ENST00000411943 390 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 ARL5AP4-201ENST00000430731 512 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 NDUFB4P6-201ENST00000436819 366 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AL162151.2-201ENST00000448875 158 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AF213884.1-201ENST00000488102 463 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 RN7SL812P-201ENST00000493791 279 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AC025465.3-201ENST00000510570 311 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AC074250.1-201ENST00000511117 192 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.680-201ENST00000516441 93 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 SCARNA13-201ENST00000516672 275 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 IGLV3-26-201ENST00000520756 302 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AC024153.1-201ENST00000603103 365 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 AC010615.1-201ENST00000594254 1764 ntBASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDC42EP3Q9UKI2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 CPHL1P-201ENST00000461341 3407 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MIR331-201ENST00000362302 94 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-778P-201ENST00000363269 103 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.183-201ENST00000363882 113 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-105P-201ENST00000363909 104 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 RNA5SP189-201ENST00000364920 115 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.483-201ENST00000384380 101 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MIR325-201ENST00000385260 98 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MIR190B-201ENST00000401119 79 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC139712.2-201ENST00000424302 339 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AL356535.1-201ENST00000440335 398 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 RPEP5-201ENST00000441137 268 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC012671.1-201ENST00000451912 203 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC107222.1-201ENST00000510899 637 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MTND1P19-201ENST00000511780 315 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 RNA5SP446-201ENST00000515955 82 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 SNORA31.18-201ENST00000517043 134 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MIR4782-201ENST00000577987 79 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MIR3690-201ENST00000580266 75 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC091178.1-203ENST00000584586 279 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC060766.3-201ENST00000591442 263 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC006557.5-201ENST00000603126 811 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC079587.1-201ENST00000603846 277 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MIR6875-201ENST00000617506 72 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 AC130454.1-201ENST00000622948 401 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 U6.99-201ENST00000637524 83 ntBASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDC42EP3Q9UKI2 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms