Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
SIX4Q9UIU6 RNU6-1208P-201ENST00000459588 107 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 RPS23P3-201ENST00000470993 430 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 RPS20P22-201ENST00000473700 357 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 AC083904.1-201ENST00000487828 231 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 AC091885.1-201ENST00000506658 268 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3□□□□□ -1.93
SIX4Q9UIU6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3□□□□□ -1.93
SIX4Q9UIU6 AC243972.3-201ENST00000539655 198 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 GTF3AP2-201ENST00000557014 266 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3□□□□□ -1.93
SIX4Q9UIU6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3□□□□□ -1.93
SIX4Q9UIU6 BNIP3P25-201ENST00000596023 559 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 CTHRC1P1-201ENST00000605383 469 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 AC009570.1-201ENST00000609599 745 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 MIR7106-201ENST00000612419 65 ntBASIC3□□□□□ -1.93
SIX4Q9UIU6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3□□□□□ -1.93
SIX4Q9UIU6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3□□□□□ -1.93
SIX4Q9UIU6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SIX4Q9UIU6 RNU6-845P-201ENST00000362578 103 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 U3.12-201ENST00000364498 214 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 Y_RNA.373-201ENST00000365600 103 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 SNORA16.2-201ENST00000390991 127 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC009161.1-201ENST00000417306 376 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 ZNF863P-201ENST00000426746 417 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AL669831.1-202ENST00000428504 417 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC087499.2-201ENST00000432861 149 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 TAAR7P-201ENST00000436141 242 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 GTF2IP13-201ENST00000438487 386 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 RPS24P13-201ENST00000442520 397 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 PRPS1P1-201ENST00000445305 876 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 RPL7P12-201ENST00000446719 750 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC007547.1-201ENST00000462177 490 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC092185.1-201ENST00000491371 97 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 HPRT1P3-201ENST00000539521 576 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 RAB11AP2-201ENST00000545905 639 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 SCOCP1-201ENST00000554676 349 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC091135.1-201ENST00000585943 307 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC069234.5-201ENST00000611056 416 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 Z99571.1-201ENST00000636677 394 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AC008568.2-201ENST00000623862 2313 ntBASIC2.99□□□□□ -1.93
SIX4Q9UIU6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
SIX4Q9UIU6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 SNORD81.2-201ENST00000365153 76 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 SNORD70.1-201ENST00000391007 85 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 RNU2-33P-201ENST00000410344 192 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 NDUFB4P5-201ENST00000415445 361 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 HSPE1P1-201ENST00000421494 318 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 MTCO3P46-201ENST00000425787 232 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AL513043.1-201ENST00000439124 535 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 PIGFP3-201ENST00000441918 722 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 RNU7-66P-201ENST00000459469 62 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 KC877373.1-201ENST00000479066 408 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 Y_RNA.654-201ENST00000497848 106 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 RNU4-49P-201ENST00000516080 140 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 RNA5SP380-201ENST00000517190 98 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 OR11H5P-201ENST00000554039 926 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 PSMA3P-201ENST00000555485 635 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC138761.3-201ENST00000579993 334 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 FGF7P1-201ENST00000582820 288 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC092747.3-201ENST00000603769 301 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 ATP1B3P1-201ENST00000605365 821 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AL512643.1-201ENST00000635735 524 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 MTND1P37-201ENST00000636562 264 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 MTND5P27-201ENST00000428871 1720 ntBASIC2.98□□□□□ -1.93
SIX4Q9UIU6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX4Q9UIU6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.97□□□□□ -1.93
SIX4Q9UIU6 RPL9P7-201ENST00000330965 580 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 RNU6-797P-201ENST00000363101 109 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 SNORA4.3-201ENST00000365564 137 ntBASIC2.97□□□□□ -1.93
SIX4Q9UIU6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms