Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 CYCSP39-201ENST00000565821 309 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AMZ2P1-203ENST00000565833 850 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AC100830.2-201ENST00000581636 240 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AL627309.6-201ENST00000606857 840 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 MIR6128-201ENST00000615528 109 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AC084781.2-201ENST00000615568 161 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AL160413.1-201ENST00000622780 310 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 Z98749.2-208ENST00000381646 500 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU6-1297P-201ENST00000384415 104 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU1-13P-201ENST00000384499 162 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU6-658P-201ENST00000384606 106 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU6-1011P-201ENST00000384668 107 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU6-370P-201ENST00000411008 104 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC099548.1-201ENST00000421443 426 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC236972.2-201ENST00000434979 310 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC007677.1-201ENST00000445757 515 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RPS29P20-201ENST00000489592 171 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC096745.1-201ENST00000509945 370 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU6-1183P-201ENST00000517054 60 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 Y_RNA.718-201ENST00000517110 102 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 RNU1-45P-201ENST00000517191 141 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AP003730.1-201ENST00000524605 285 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 APOOP3-201ENST00000536787 586 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 IMMP1LP2-201ENST00000552954 492 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 MIR4286-201ENST00000580651 93 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 MTND4LP5-201ENST00000605152 292 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 ARF4P1-201ENST00000605447 541 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC008962.1-201ENST00000605729 304 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 AC099654.10-201ENST00000640395 161 ntBASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX1-2Q9UD57 MTND5P19-201ENST00000424872 1794 ntBASIC3.28□□□□□ -1.89
NKX1-2Q9UD57 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AL021368.2-201ENST00000606125 5352 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 RNA5SP130-201ENST00000364431 114 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 RNU1-73P-201ENST00000383971 164 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 SNORA9-201ENST00000384215 133 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AL096701.2-201ENST00000416920 238 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AL353729.1-201ENST00000425044 720 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 OR4C10P-201ENST00000434991 931 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 RNU7-187P-201ENST00000458985 68 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 UQCRHP4-201ENST00000471686 272 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 HIGD1AP1-201ENST00000550979 275 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 MIR4782-201ENST00000577987 79 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AL645944.1-201ENST00000603857 493 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC012468.1-201ENST00000604888 430 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC138627.2-201ENST00000624202 601 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 Z69720.2-201ENST00000624755 279 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 MIR3653-201ENST00000625572 110 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 AC022336.2-201ENST00000568966 2538 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 MAPK10-362ENST00000641864 4484 ntBASIC3.27□□□□□ -1.89
NKX1-2Q9UD57 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms