Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNTN3Q9P232 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNTN3Q9P232 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNTN3Q9P232 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNTN3Q9P232 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CNTN3Q9P232 RNA5SP28-201ENST00000363841 119 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 RNU6-746P-201ENST00000384112 109 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 Y_RNA.464-201ENST00000384282 110 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 RNU6-378P-201ENST00000384324 107 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 Y_RNA.541-201ENST00000384640 113 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 MIR1298-201ENST00000408783 112 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 AC009237.8-201ENST00000445492 379 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 snoU109.2-201ENST00000459316 135 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 AC099522.1-202ENST00000514718 367 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 AC023043.4-201ENST00000612081 449 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 SCARNA4-201ENST00000629045 128 ntBASIC4.61□□□□□ -1.67
CNTN3Q9P232 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.61□□□□□ -1.67
CNTN3Q9P232 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CNTN3Q9P232 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC118273.1-201ENST00000525324 3006 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 SCN1A-220ENST00000641603 12506 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 Y_RNA.16-201ENST00000362421 102 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 Y_RNA.83-201ENST00000363005 113 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 SNORD63-201ENST00000384262 68 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 SNORD66.1-201ENST00000391230 76 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 RNA5SP129-201ENST00000410276 118 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 Y_RNA.793-201ENST00000411222 111 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 RPL17P36-201ENST00000420302 549 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AL358453.1-201ENST00000422522 250 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC092017.2-201ENST00000427600 362 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 COX6B1P7-201ENST00000430845 235 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 SNRPEP9-201ENST00000436794 238 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 MIR4782-201ENST00000577987 79 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 MIR4659A-201ENST00000580269 81 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 RN7SL600P-201ENST00000581811 299 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC136601.2-201ENST00000604356 474 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC097372.5-201ENST00000623665 376 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC068724.3-201ENST00000625906 87 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 U6.99-201ENST00000637524 83 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 AC009541.1-201ENST00000438279 2662 ntBASIC4.6□□□□□ -1.67
CNTN3Q9P232 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTN3Q9P232 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.6□□□□□ -1.67
CNTN3Q9P232 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTN3Q9P232 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTN3Q9P232 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNTN3Q9P232 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNTN3Q9P232 RNU6-1301P-201ENST00000362724 104 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 SNORD113-8-201ENST00000363497 74 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 RNU6-105P-201ENST00000363909 104 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 RNU6-662P-201ENST00000384253 104 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AL033519.2-201ENST00000403958 392 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 U3.37-201ENST00000408528 213 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AL160275.2-201ENST00000412010 394 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 AC007389.2-201ENST00000434630 306 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 Z82210.1-201ENST00000440037 231 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 ABCF2P2-201ENST00000450549 296 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 NDUFB4P10-201ENST00000452541 359 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 Y_RNA.644-201ENST00000459006 113 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 U8.22-201ENST00000459141 133 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 RPS26P28-201ENST00000470806 348 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AL132838.2-201ENST00000492041 314 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 Y_RNA.674-201ENST00000516362 113 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AP006245.1-201ENST00000522549 120 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNTN3Q9P232 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 AC024153.1-201ENST00000603103 365 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AL591034.3-201ENST00000605511 685 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 AC073657.2-201ENST00000605661 303 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 RMST_6.1-201ENST00000611980 203 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 U2.14-201ENST00000615943 113 ntBASIC4.59□□□□□ -1.67
CNTN3Q9P232 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNTN3Q9P232 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.59□□□□□ -1.67
CNTN3Q9P232 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CNTN3Q9P232 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms