Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL109918.3-201ENST00000603072 338 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AC174048.1-201ENST00000603389 144 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AP000942.3-201ENST00000603702 160 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.6-201ENST00000603753 252 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.11-201ENST00000604059 253 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AC008162.1-201ENST00000604718 254 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.1-201ENST00000604752 252 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.5-201ENST00000605253 252 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.12-201ENST00000605291 253 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.8-201ENST00000605353 252 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL670379.7-201ENST00000605823 252 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 MIR7844-201ENST00000616161 122 ntBASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC10Q9NYD6 HSPA8P4-201ENST00000511877 1920 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 RNU6-960P-201ENST00000364056 120 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AL356432.1-201ENST00000405809 419 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AL109913.1-201ENST00000421173 514 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC104651.1-201ENST00000427559 735 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 MTND1P12-201ENST00000455231 147 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 MTND1P22-201ENST00000510572 951 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC107393.1-201ENST00000512403 346 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 RNA5SP112-201ENST00000515937 99 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 RNU2-44P-201ENST00000516795 194 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 PCMTD1P2-201ENST00000565017 355 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC024619.4-201ENST00000580924 316 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC108747.1-201ENST00000609508 535 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AL365204.3-201ENST00000612448 685 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 uc_338.14-201ENST00000613162 166 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 AC092140.2-201ENST00000618027 521 ntBASIC2.21□□□□□ -2.06
HOXC10Q9NYD6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC092104.1-201ENST00000497346 1441 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 ELOCP17-201ENST00000414751 326 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 RPL30P4-201ENST00000429309 333 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 MTCYBP39-201ENST00000437562 491 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 BRK1P2-201ENST00000442875 223 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 RPL23AP63-201ENST00000498752 471 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC112204.1-201ENST00000502591 103 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 SNORA3.4-201ENST00000515969 96 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC021739.1-201ENST00000559631 174 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 MIR3118-1-201ENST00000581787 76 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 SNRPGP19-201ENST00000603826 189 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC009314.1-201ENST00000603871 304 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC104010.1-201ENST00000616889 150 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 FRG1KP-201ENST00000623592 341 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 AC007671.2-201ENST00000637344 619 ntBASIC2.2□□□□□ -2.06
HOXC10Q9NYD6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 CKAP2P1-201ENST00000555477 2049 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 NACAP2-201ENST00000318548 624 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 RNU6-501P-201ENST00000364072 100 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 RNU6-512P-201ENST00000364438 103 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 RNY3P13-201ENST00000365542 102 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 RNU5E-6P-201ENST00000365574 115 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 BTF3L4P3-201ENST00000418879 476 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 RAC1P6-201ENST00000423911 575 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 HMGB1P27-201ENST00000431429 603 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 FABP5P14-201ENST00000437273 393 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AL512286.1-201ENST00000439244 400 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AF213884.2-201ENST00000510417 903 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AC022616.6-201ENST00000520479 119 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AC107934.1-201ENST00000522215 217 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AC007363.1-201ENST00000604736 620 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 AC004223.4-201ENST00000612426 332 ntBASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC10Q9NYD6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms