Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 MIR3160-1-201ENST00000577972 85 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC005730.3-201ENST00000583067 366 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC021646.1-201ENST00000605469 484 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC244517.12-201ENST00000623581 663 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC119674.1-207ENST00000641355 633 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC007823.1-201ENST00000569932 1566 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AL359854.1-201ENST00000614203 1594 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC010329.5-201ENST00000623497 2174 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC032011.1-201ENST00000611703 1549 ntBASIC3.65□□□□□ -1.82
DDX56Q9NY93 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
DDX56Q9NY93 SNORA68.1-201ENST00000364537 132 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 RPL21P111-201ENST00000418453 477 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 RPL7P37-201ENST00000425095 738 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 AP001324.2-201ENST00000461163 319 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 RPL23AP67-201ENST00000465341 474 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC008628.2-201ENST00000502605 298 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AK3P2-201ENST00000507976 429 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 SMURF2P1-201ENST00000514992 481 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 SCARNA17.1-201ENST00000516211 143 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 SCARNA17.2-201ENST00000516334 143 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 RN7SKP21-201ENST00000516503 220 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC100830.2-201ENST00000581636 240 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 MIR4765-201ENST00000585007 77 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DDX56Q9NY93 MIR6798-201ENST00000612887 67 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 SCARNA17.4-201ENST00000614296 143 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 MIR7515-201ENST00000637837 67 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX56Q9NY93 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 AL109809.4-201ENST00000603520 2185 ntBASIC3.65□□□□□ -1.83
DDX56Q9NY93 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX56Q9NY93 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 RNA5SP390-201ENST00000410191 113 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 RNU6-1148P-201ENST00000410992 104 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AL513477.1-202ENST00000417061 214 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 UBE2V1P4-201ENST00000425374 344 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC091390.1-201ENST00000433904 331 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 FABP5P14-201ENST00000437273 393 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC004383.1-201ENST00000438135 289 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 RPL7P12-201ENST00000446719 750 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC091179.1-201ENST00000461606 579 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC103987.1-201ENST00000473394 348 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 RNA5SP112-201ENST00000515937 99 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 RNU6-1332P-201ENST00000516666 104 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC105137.2-201ENST00000569073 466 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC012493.2-201ENST00000595083 291 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 VN1R85P-201ENST00000601587 426 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 VN1R107P-201ENST00000601784 209 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC019159.1-201ENST00000605094 187 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 CTHRC1P1-201ENST00000605383 469 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AL355073.2-201ENST00000612106 557 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC024581.2-201ENST00000619986 252 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 AC092794.2-201ENST00000620933 563 ntBASIC3.64□□□□□ -1.83
DDX56Q9NY93 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX56Q9NY93 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX56Q9NY93 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX56Q9NY93 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
DDX56Q9NY93 RBBP8P1-201ENST00000449447 1844 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 MIR30E-201ENST00000362104 92 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC138623.1-201ENST00000418060 216 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 RPL35AP12-201ENST00000425362 338 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX56Q9NY93 NOTCH2P1-201ENST00000443481 624 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC013470.1-201ENST00000453438 462 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 PMCHL2-203ENST00000457791 237 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 RNU6-1037P-201ENST00000459571 107 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 RPL36AP48-201ENST00000485521 314 ntBASIC3.63□□□□□ -1.83
DDX56Q9NY93 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms