Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-298P-201ENST00000390888 96 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RPL23AP36-201ENST00000413895 458 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC092809.3-201ENST00000415453 231 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC139712.2-201ENST00000424302 339 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 TXNL1P1-201ENST00000429528 554 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RPS15AP10-201ENST00000432472 382 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL591212.2-201ENST00000433923 257 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RPS25P9-201ENST00000435591 252 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 TIMM9P1-201ENST00000436122 256 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC027119.1-201ENST00000440877 241 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 CALM1P1-201ENST00000442082 433 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 DYNLT3P2-201ENST00000442517 295 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL135938.1-201ENST00000443141 297 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RPS29P28-201ENST00000446439 141 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RPL23AP35-201ENST00000451906 501 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC108059.3-201ENST00000456388 214 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 DUXAP8-207ENST00000456786 622 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 SNORD97-201ENST00000459187 142 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RPL26P26-201ENST00000480251 434 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RN7SL432P-201ENST00000484057 298 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 MTND4LP31-201ENST00000514859 294 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RNA5SP281-201ENST00000516504 135 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AP002770.2-201ENST00000543613 532 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC022080.3-201ENST00000544433 482 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 SNRPGP18-201ENST00000553000 214 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 TRAV32-201ENST00000553993 340 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 MIR3146-201ENST00000580367 79 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 HSPE1P19-201ENST00000603327 295 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL022154.1-201ENST00000604698 785 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL355802.3-201ENST00000607571 545 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC131235.4-201ENST00000609288 620 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC021755.4-201ENST00000616620 456 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL590240.4-201ENST00000616908 390 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AC006386.1-201ENST00000619436 415 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 AL121895.2-201ENST00000619558 447 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AP000560.1-201ENST00000624150 1937 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 ZNF876P-202ENST00000398732 1485 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 SNORD3E-201ENST00000362899 217 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-511P-201ENST00000363496 107 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNA5SP435-201ENST00000364044 108 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-395P-201ENST00000365662 106 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-769P-201ENST00000384407 104 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-160P-201ENST00000384591 107 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 MIR621-201ENST00000384919 96 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-278P-201ENST00000390945 109 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RNA5SP390-201ENST00000410191 113 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 Y_RNA.623-201ENST00000411128 95 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 VPS26BP1-201ENST00000417155 755 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 CBX3P6-201ENST00000430257 527 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RPL39P29-201ENST00000447779 157 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AL139824.2-201ENST00000458731 1095 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC130509.1-201ENST00000464158 433 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 MTND1P16-201ENST00000465177 898 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RPL30P7-201ENST00000479312 323 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 RPL9P6-201ENST00000492764 598 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC097462.2-201ENST00000504623 481 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 SUMO2P5-201ENST00000506790 245 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC069306.1-201ENST00000507006 843 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC119751.4-201ENST00000507498 357 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC009646.1-201ENST00000510455 318 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AP000907.2-201ENST00000530827 353 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 VN1R82P-201ENST00000601481 356 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC068790.4-201ENST00000602474 263 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AP000860.1-201ENST00000605250 559 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 MIR15A-201ENST00000607334 83 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 ATP5A1P2-202ENST00000616464 443 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC126544.2-201ENST00000625174 749 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 AC008993.2-201ENST00000631744 806 ntBASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CDC42SE1Q9NRR8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms