Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AL670379.10-201ENST00000604330 253 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AL033523.1-201ENST00000605153 153 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AL670379.4-201ENST00000605279 254 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AL670379.9-201ENST00000605428 253 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC069294.1-201ENST00000608397 350 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC046143.2-201ENST00000609789 160 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AP001486.3-201ENST00000615334 372 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 HMGB1P24-202ENST00000615653 685 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 U6.42-201ENST00000618440 107 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC010378.1-201ENST00000619270 362 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 Z69908.1-201ENST00000622603 247 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 MIR6766-201ENST00000622641 72 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC092656.1-203ENST00000624134 423 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC007336.1-201ENST00000576365 3828 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC062016.1-201ENST00000355719 319 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 RNU6-7-201ENST00000364784 107 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 SNORD115-7-201ENST00000365306 82 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 RNU6-8-201ENST00000365467 107 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 MIR10A-201ENST00000385043 110 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 U6atac.2-201ENST00000408644 118 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 BX295541.1-201ENST00000417774 250 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 PIGFP2-201ENST00000421400 651 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 COTL1P1-201ENST00000422309 375 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AL031667.1-201ENST00000440222 725 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AL360271.2-201ENST00000447710 161 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC079448.1-201ENST00000449377 373 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC009961.3-201ENST00000449832 765 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 RPS3AP14-201ENST00000483907 780 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 MRPL42P6-201ENST00000486397 371 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC011005.2-201ENST00000487324 359 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC018437.1-201ENST00000492214 406 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC097462.2-201ENST00000504623 481 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 OR5AL2P-201ENST00000532185 920 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC087752.4-201ENST00000605911 462 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC103810.6-201ENST00000606708 136 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 RNU6-91P-201ENST00000607774 107 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC006566.1-201ENST00000608943 513 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC135507.2-201ENST00000612443 309 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC011890.2-201ENST00000613393 294 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 MIR6817-201ENST00000615588 66 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC024581.2-201ENST00000619986 252 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC244517.12-201ENST00000623581 663 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC006386.2-201ENST00000624491 75 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC012005.1-201ENST00000624575 75 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 ELL2P3-201ENST00000457883 1602 ntBASIC1.88□□□□□ -2.11
CCL28Q9NRJ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 RNU6-72P-201ENST00000384285 79 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 RNU6-1179P-201ENST00000384667 107 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MIR491-201ENST00000384877 84 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MIR454-201ENST00000390180 115 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AL591416.1-201ENST00000404015 867 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MIR1302-8-201ENST00000408342 128 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP184-201ENST00000411071 108 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AL353621.1-201ENST00000418219 243 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 MTCO3P30-201ENST00000426425 670 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 USP9YP29-201ENST00000445112 563 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC108938.1-201ENST00000451204 136 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 RNU6-956P-201ENST00000458868 103 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 KLF3P2-201ENST00000465138 268 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 RPL36AP48-201ENST00000485521 314 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC234781.5-201ENST00000508429 271 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC104806.1-201ENST00000508720 308 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AP004607.1-201ENST00000524456 203 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC025678.1-201ENST00000567861 338 ntBASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.87□□□□□ -2.11
CCL28Q9NRJ3 AC012213.3-201ENST00000577199 777 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms