Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC006445.2-201ENST00000510061 472 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 AP005639.2-201ENST00000527592 928 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 AP000889.1-201ENST00000530968 660 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC010378.1-201ENST00000619270 362 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 U6.99-201ENST00000637524 83 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTA1Q9NP79 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 AF127577.6-201ENST00000623352 2191 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VTA1Q9NP79 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 RNU6-778P-201ENST00000363269 103 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RNU6-384P-201ENST00000364900 104 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RNU6-1329P-201ENST00000365664 107 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RNU1-73P-201ENST00000383971 164 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RNU6-328P-201ENST00000390887 106 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RPL5P18-201ENST00000406671 891 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 AC006028.1-201ENST00000438379 402 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 Z75741.1-201ENST00000446793 314 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 CEACAMP4-201ENST00000457676 421 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 AC113155.1-201ENST00000511141 769 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RN7SKP24-201ENST00000515888 284 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 RNU1-103P-201ENST00000516502 125 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 LINC00933-203ENST00000559812 219 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 MIR3186-201ENST00000577404 85 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 MIR5004-201ENST00000579078 107 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 AC022140.2-201ENST00000623500 188 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 Z69720.2-201ENST00000624755 279 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 AC244205.2-202ENST00000635781 342 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.84□□□□□ -1.79
VTA1Q9NP79 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.84□□□□□ -1.79
VTA1Q9NP79 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
VTA1Q9NP79 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
VTA1Q9NP79 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VTA1Q9NP79 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTA1Q9NP79 RNU6-1011P-201ENST00000384668 107 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 MIR10A-201ENST00000385043 110 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 MTCYBP4-201ENST00000401524 249 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 RPL12P25-201ENST00000455592 494 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC130509.1-201ENST00000464158 433 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 RN7SL504P-201ENST00000494496 287 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 HMGB3P15-201ENST00000507326 574 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 RNU6-273P-201ENST00000516937 96 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AP006245.1-201ENST00000522549 120 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC026333.2-201ENST00000542164 106 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC093027.1-201ENST00000546698 429 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC025423.5-201ENST00000550230 219 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 MIR5047-201ENST00000579212 100 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 MIR4325-201ENST00000583049 90 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 MIR5690-201ENST00000583739 73 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC092628.2-201ENST00000622492 339 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.83□□□□□ -1.8
VTA1Q9NP79 NCAPGP1-201ENST00000505112 1814 ntBASIC3.83□□□□□ -1.8
VTA1Q9NP79 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTA1Q9NP79 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 Y_RNA.67-201ENST00000362870 100 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 AL356057.2-201ENST00000403318 432 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AL353729.1-201ENST00000425044 720 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 RPL23AP82-202ENST00000427528 469 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 RPS3AP52-201ENST00000435639 297 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 Y_RNA.632-201ENST00000459189 102 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 AL049830.2-201ENST00000480072 201 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 RNU6-559P-201ENST00000516151 98 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC016727.1-205ENST00000605437 569 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 AC126177.8-201ENST00000618339 1015 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms