Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC110760.3-202ENST00000515177 371 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 SNORA4.4-201ENST00000515921 135 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 CYP2C61P-201ENST00000604072 290 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RNU5E-1-201ENST00000362477 120 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 SNORA40C-201ENST00000391285 128 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MTND3P20-201ENST00000407663 186 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MIR548J-201ENST00000408833 112 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RNU6-516P-201ENST00000411381 104 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AL139421.1-201ENST00000423010 169 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RPL30P4-201ENST00000429309 333 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MTND2P20-201ENST00000440805 661 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MTCO3P45-201ENST00000443036 613 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RNU7-136P-201ENST00000458819 69 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RNU5B-3P-201ENST00000516601 115 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RNU6-714P-201ENST00000516963 103 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AP001542.1-201ENST00000591314 200 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AL445435.1-201ENST00000604232 665 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC069304.2-201ENST00000605154 435 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC087045.1-201ENST00000605856 382 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC009974.1-201ENST00000608881 455 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC021755.4-201ENST00000616620 456 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AL357080.1-201ENST00000617394 239 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MTCO1P56-201ENST00000401674 224 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 MIR1283-2-201ENST00000408621 87 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 CALM1P1-201ENST00000442082 433 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RPL37P6-201ENST00000460682 294 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC092436.3-201ENST00000511788 257 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RN7SKP179-201ENST00000516126 217 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AL512347.1-201ENST00000566420 503 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 FAM106DP-201ENST00000586416 501 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC004987.4-201ENST00000603383 338 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC010975.3-201ENST00000618727 978 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 AC097460.3-201ENST00000623099 442 ntBASIC0.96□□□□□ -2.26
KIAA1549Q9HCM3 RNU6-529P-201ENST00000363383 104 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 SNORA18.2-201ENST00000383865 132 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AL591034.2-201ENST00000402839 359 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC097463.2-201ENST00000421074 142 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 RPL36AP53-201ENST00000432891 316 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC079448.1-201ENST00000449377 373 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 HMGB1P36-201ENST00000487709 576 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 RNU6-970P-201ENST00000516312 107 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 TRAV32-201ENST00000553993 340 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC122134.1-202ENST00000569111 1201 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 MIR4782-201ENST00000577987 79 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 MIR5708-201ENST00000579723 85 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC069545.1-201ENST00000605671 358 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC103810.8-201ENST00000607347 118 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC108706.1-201ENST00000611053 297 ntBASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.95□□□□□ -2.26
KIAA1549Q9HCM3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 USP9YP22-201ENST00000438971 294 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 MTND1P18-201ENST00000448191 573 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AL590365.1-201ENST00000450788 243 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AC026414.1-201ENST00000504046 698 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 MTCYBP16-201ENST00000509187 1129 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 CYB5AP5-201ENST00000549779 389 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 MIR4422-201ENST00000581938 83 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 VN1R107P-201ENST00000601784 209 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 AC007490.1-201ENST00000624321 703 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 NACAP2-201ENST00000318548 624 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 MIR518A2-201ENST00000384966 87 ntBASIC0.94□□□□□ -2.26
KIAA1549Q9HCM3 SKA2P1-201ENST00000425592 390 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms