Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 CUL1P1-201ENST00000509510 2425 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.135-201ENST00000363439 95 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 MIR301A-201ENST00000385261 86 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 MIR548K-201ENST00000408406 116 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 RNU2-3P-201ENST00000410144 191 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 RNU6-607P-201ENST00000411283 108 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 RPS20P15-201ENST00000412792 311 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 VN1R36P-201ENST00000414936 291 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL353621.1-201ENST00000418219 243 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 MYL8P-204ENST00000431574 518 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 SNRPEP4-201ENST00000435815 279 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 SETP5-201ENST00000437270 562 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 MTND4P17-201ENST00000470444 350 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 RNU6-566P-201ENST00000516790 107 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 CYCSP27-201ENST00000527643 293 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL157871.3-201ENST00000557231 293 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 MIR5692A1-201ENST00000580523 69 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC023043.2-201ENST00000589678 1026 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC012493.2-201ENST00000595083 291 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC113139.1-201ENST00000605049 239 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL353621.2-201ENST00000605340 133 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AL138726.1-201ENST00000614873 333 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC007785.2-201ENST00000598627 1916 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AF117829.1-206ENST00000621883 3802 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
USP29Q9HBJ7 AC005183.1-201ENST00000603687 1979 ntBASIC3.38□□□□□ -1.87
USP29Q9HBJ7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.67-201ENST00000362870 100 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 SNORD56.3-201ENST00000363507 71 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 MIR450B-201ENST00000401182 78 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 CYCSP33-201ENST00000414485 327 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC245291.1-201ENST00000419501 328 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC092047.1-201ENST00000424997 240 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC007919.1-201ENST00000429380 217 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 RPS3AP52-201ENST00000435639 297 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 PIGFP3-201ENST00000441918 722 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 RPL32P28-201ENST00000443577 397 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AL135752.1-201ENST00000479477 471 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 RNU6-143P-201ENST00000516942 93 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 RNA5SP290-201ENST00000517133 127 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 RNA5SP454-201ENST00000517231 127 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC044792.1-201ENST00000593294 196 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AC136601.2-201ENST00000604356 474 ntBASIC3.37□□□□□ -1.87
USP29Q9HBJ7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.37□□□□□ -1.87
USP29Q9HBJ7 AL365361.1-201ENST00000566942 3481 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 SNORD116-11-201ENST00000383882 92 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 RNU4-14P-201ENST00000410858 122 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AL590383.1-201ENST00000428602 75 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 RPL23AP69-201ENST00000431134 458 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 GPM6BP2-201ENST00000432046 144 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 Z82210.1-201ENST00000440037 231 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 GPM6BP1-201ENST00000446387 144 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 CECR9-201ENST00000453421 199 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AC008716.1-201ENST00000511084 513 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
USP29Q9HBJ7 RNU6-273P-201ENST00000516937 96 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 AC009902.1-201ENST00000519351 183 ntBASIC3.36□□□□□ -1.87
USP29Q9HBJ7 COPS8P3-201ENST00000526024 482 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms