Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 RNU6-295P-201ENST00000516901 104 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 Y_RNA.717-201ENST00000517106 92 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC025755.1-201ENST00000521306 278 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC011979.2-201ENST00000527568 352 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC006199.1-201ENST00000548728 219 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC078899.2-201ENST00000595282 212 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AL391813.1-201ENST00000603098 260 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 Z99289.3-201ENST00000605586 594 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC022893.3-201ENST00000607665 437 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 AC122133.1-201ENST00000613964 233 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 MIR7157-201ENST00000635801 60 ntBASIC2.41□□□□□ -2.02
RPAP3Q9H6T3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
RPAP3Q9H6T3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
RPAP3Q9H6T3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RPAP3Q9H6T3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RPAP3Q9H6T3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 RNU6-39P-201ENST00000384344 107 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AL031577.2-201ENST00000404133 280 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AL591212.2-201ENST00000433923 257 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC119618.1-201ENST00000434191 222 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 FABP5P13-201ENST00000452144 328 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 ART2BP-201ENST00000453501 499 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC026801.1-201ENST00000497178 464 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC117522.2-201ENST00000510049 657 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 MTND1P22-201ENST00000510572 951 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 RNU6-991P-201ENST00000516168 107 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 RNU6-677P-201ENST00000516914 101 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 RNU6-548P-201ENST00000517083 115 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC084851.1-201ENST00000529105 249 ntBASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.4□□□□□ -2.03
RPAP3Q9H6T3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL109809.4-201ENST00000603520 2185 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 RNU5E-1-201ENST00000362477 120 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 SNORD56.2-201ENST00000363242 71 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 Y_RNA.534-201ENST00000384599 112 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL356379.1-201ENST00000414105 126 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 OR51A5P-201ENST00000415429 942 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC114491.1-201ENST00000416095 246 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 CYCSP48-201ENST00000417124 323 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL109913.1-201ENST00000421173 514 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 HMGN2P38-201ENST00000423806 265 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL161651.1-201ENST00000440882 223 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC092001.1-201ENST00000453012 261 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 GZMAP1-201ENST00000503054 631 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 SNORA25.11-201ENST00000515935 105 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 RNU6-572P-201ENST00000516724 80 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 SNORD19.2-201ENST00000516978 73 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC009902.1-201ENST00000519351 183 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC106038.2-201ENST00000520706 568 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC022878.1-201ENST00000530684 149 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC012065.4-201ENST00000602445 679 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC112191.3-201ENST00000604371 277 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC092354.1-201ENST00000606057 376 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AL353997.5-201ENST00000618886 171 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 AC099654.13-201ENST00000639774 207 ntBASIC2.39□□□□□ -2.03
RPAP3Q9H6T3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 HSPE1P11-201ENST00000339579 310 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 Y_RNA.169-201ENST00000363745 96 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 Z98749.2-208ENST00000381646 500 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 RNU5A-2P-201ENST00000384337 116 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 MRPL42P2-201ENST00000403169 426 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 MTND1P30-201ENST00000441241 901 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 BRK1P2-201ENST00000442875 223 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 AC124916.1-201ENST00000444020 547 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 AL031659.1-201ENST00000447075 539 ntBASIC2.38□□□□□ -2.03
RPAP3Q9H6T3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms