Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 Y_RNA.445-201ENST00000384168 102 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
VPS16Q9H269 RN7SKP158-201ENST00000410453 326 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 RNA5SP111-201ENST00000411386 101 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 AC092809.3-201ENST00000415453 231 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS16Q9H269 MTND3P2-201ENST00000438452 342 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 RPL32P28-201ENST00000443577 397 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 SSXP4-201ENST00000451349 245 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS16Q9H269 SNORA84-201ENST00000459229 133 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 TRBV1-201ENST00000476502 284 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 RPL21P93-201ENST00000480465 489 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 Y_RNA.654-201ENST00000497848 106 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS16Q9H269 SNORA67.7-201ENST00000516664 135 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 MTND4P7-201ENST00000523876 130 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS16Q9H269 AP000889.2-201ENST00000532684 490 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 DNAJC8P1-201ENST00000554535 372 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 HMGB1P14-201ENST00000557424 591 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 AL138889.2-201ENST00000603883 242 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS16Q9H269 Z82243.1-201ENST00000609432 473 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS16Q9H269 AC006133.1-201ENST00000617106 264 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS16Q9H269 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
VPS16Q9H269 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS16Q9H269 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS16Q9H269 AL359693.1-201ENST00000614959 2407 ntBASIC3.5□□□□□ -1.85
VPS16Q9H269 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
VPS16Q9H269 RNA5SP50-201ENST00000363731 107 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VPS16Q9H269 SNORA22B-201ENST00000383876 138 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 Y_RNA.422-201ENST00000384054 114 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 MIR301A-201ENST00000385261 86 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RPL21P3-201ENST00000395517 478 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RNU4-46P-201ENST00000410818 138 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RNU6-370P-201ENST00000411008 104 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 ARL5AP1-201ENST00000418991 388 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS16Q9H269 PMCHL1-202ENST00000423102 261 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RPL7P46-201ENST00000425129 740 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AL591704.1-201ENST00000432574 275 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RPS24P13-201ENST00000442520 397 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AL590664.1-201ENST00000448065 339 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AC146507.2-201ENST00000460608 476 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RPL21P8-201ENST00000465083 535 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 TRBVA-201ENST00000498804 316 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 MTND4LP22-201ENST00000508209 276 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 RNU6-914P-201ENST00000516749 109 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AC090136.1-201ENST00000520009 240 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.49□□□□□ -1.85
VPS16Q9H269 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS16Q9H269 MIR2682-201ENST00000580305 110 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 MIR3672-201ENST00000584290 82 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AC136443.5-201ENST00000603741 370 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AC016925.2-201ENST00000605108 242 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AC008962.1-201ENST00000605729 304 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 MIR15A-201ENST00000607334 83 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 DUSP12P1-201ENST00000612874 516 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 uc_338.25-201ENST00000613756 156 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 AC068831.7-201ENST00000616954 363 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS16Q9H269 AC244517.12-201ENST00000623581 663 ntBASIC3.49□□□□□ -1.85
VPS16Q9H269 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS16Q9H269 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS16Q9H269 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS16Q9H269 AC093908.1-201ENST00000623125 8092 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
VPS16Q9H269 Y_RNA.144-201ENST00000363521 113 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 Y_RNA.145-201ENST00000363527 102 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 RNU6-1013P-201ENST00000384180 107 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 Y_RNA.534-201ENST00000384599 112 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 RNU6-308P-201ENST00000390957 107 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 CISD1P1-201ENST00000393907 327 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AL592114.1-201ENST00000403842 483 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS16Q9H269 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS16Q9H269 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AC005019.1-201ENST00000436455 431 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS16Q9H269 FABP5P15-201ENST00000453566 214 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AL135752.1-201ENST00000479477 471 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 RPL32P34-201ENST00000486380 400 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AC093303.1-201ENST00000514549 295 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 RNU6-566P-201ENST00000516790 107 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AL137161.1-201ENST00000532231 390 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS16Q9H269 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
VPS16Q9H269 AC008737.2-201ENST00000599446 118 ntBASIC3.48□□□□□ -1.85
VPS16Q9H269 AC136601.2-201ENST00000604356 474 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms