Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RPL7P43-201ENST00000478876 753 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 MRPL42P6-201ENST00000486397 371 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC008526.1-201ENST00000509149 338 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AP005902.1-201ENST00000521358 186 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC135279.1-201ENST00000543493 504 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC079598.5-201ENST00000547460 117 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC121758.2-201ENST00000553271 193 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 MIR548AC-201ENST00000585049 88 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC008521.1-201ENST00000587471 187 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC090578.1-201ENST00000604955 591 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AP000770.2-201ENST00000623694 100 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 AC120349.3-201ENST00000624377 529 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
DDX47Q9H0S4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.36□□□□□ -2.03
DDX47Q9H0S4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 RNU1-72P-201ENST00000362976 153 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 SNORD14B-201ENST00000364533 90 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 MIR578-201ENST00000384828 96 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 SNORA40.3-201ENST00000390964 122 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 RNU6-195P-201ENST00000411352 109 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AL627311.1-201ENST00000431514 115 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 MTATP6P16-201ENST00000434543 526 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC009961.2-201ENST00000435771 251 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC073614.1-201ENST00000438690 650 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 NDUFB1P2-201ENST00000449477 176 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 RPS3P1-201ENST00000456781 192 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC090572.1-201ENST00000519251 160 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 DUXAP5-201ENST00000529668 529 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 MIR6852-201ENST00000621699 66 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC092656.1-203ENST00000624134 423 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 AC019226.2-201ENST00000625973 424 ntBASIC2.35□□□□□ -2.03
DDX47Q9H0S4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX47Q9H0S4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 RPS4XP8-201ENST00000402039 771 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 EEF1A1P40-201ENST00000412883 573 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC092447.3-201ENST00000426027 686 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 RPS6P15-201ENST00000431996 751 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 RPL7P12-201ENST00000446719 750 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AL136380.1-201ENST00000447970 162 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 GAPDHP17-201ENST00000449858 1001 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 SNRPGP9-201ENST00000456025 225 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 MTCYBP20-201ENST00000524239 1129 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AL133241.1-201ENST00000556832 487 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC012414.6-201ENST00000568241 401 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 MIR3682-201ENST00000581338 84 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 NIFKP6-201ENST00000598115 845 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AL138889.2-201ENST00000603883 242 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 SNORD14A-201ENST00000606526 91 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 RNU6-91P-201ENST00000607774 107 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AP001506.1-201ENST00000615444 211 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC009233.1-201ENST00000616477 371 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC025034.2-201ENST00000623264 286 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC091931.1-201ENST00000623488 728 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 AC110994.2-201ENST00000635481 492 ntBASIC2.34□□□□□ -2.03
DDX47Q9H0S4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
DDX47Q9H0S4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
DDX47Q9H0S4 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.04
DDX47Q9H0S4 FGF7P2-201ENST00000332473 296 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 RNU6-179P-201ENST00000363350 107 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 RNU6-297P-201ENST00000384636 107 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 MIR10A-201ENST00000385043 110 ntBASIC2.33□□□□□ -2.04
DDX47Q9H0S4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms