Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC113Q9H0I3 AC007656.2-201ENST00000624902 4547 ntBASIC4.13□□□□□ -1.75
CCDC113Q9H0I3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC113Q9H0I3 ADAM3A-203ENST00000461344 2157 ntBASIC4.13□□□□□ -1.75
CCDC113Q9H0I3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC113Q9H0I3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC113Q9H0I3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 RNU6-527P-201ENST00000363425 104 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 SNORA73.2-201ENST00000364946 201 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Z98749.2-208ENST00000381646 500 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.445-201ENST00000384168 102 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 ATP5HP2-201ENST00000433885 485 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AC098831.1-201ENST00000440661 216 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 DAP3P1-201ENST00000441522 278 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AL118496.2-201ENST00000448300 230 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 RPS27AP10-201ENST00000496103 208 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AL391261.3-201ENST00000557194 520 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AC011494.1-201ENST00000596454 237 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.812-201ENST00000610788 101 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.784-201ENST00000613803 101 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AL138880.2-201ENST00000616214 239 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.787-201ENST00000616522 101 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.780-201ENST00000617336 101 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.801-201ENST00000619005 101 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 AC092608.2-201ENST00000624427 218 ntBASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC113Q9H0I3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AP001148.1-201ENST00000624124 2359 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.197-201ENST00000364004 102 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 RNU6-1317P-201ENST00000364582 104 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 SNORD42.2-201ENST00000365570 69 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.404-201ENST00000383978 102 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 MIR559-201ENST00000385188 96 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AL513475.1-201ENST00000406602 315 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 MIR548P-201ENST00000408336 84 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 USMG5P1-201ENST00000425964 177 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 FTH1P25-201ENST00000447665 469 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC125238.1-201ENST00000448842 249 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.631-201ENST00000459607 101 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC133134.1-201ENST00000466800 359 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 RPL23AP49-201ENST00000492925 468 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC114801.2-201ENST00000503825 781 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 RNU1-95P-201ENST00000516357 160 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 RNU1-128P-201ENST00000516704 160 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AP003072.1-201ENST00000531740 145 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AP000867.2-201ENST00000532468 320 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC005899.2-201ENST00000584353 90 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AC020895.1-201ENST00000595362 272 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 AL451007.1-201ENST00000595491 289 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 U4.7-201ENST00000638126 106 ntBASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC113Q9H0I3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 RNU6-78P-201ENST00000362897 107 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 RNU6-428P-201ENST00000362942 107 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 RNU6-1280P-201ENST00000365211 107 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 MIR521-1-201ENST00000384902 87 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 PTMAP2-201ENST00000397627 327 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 HLFP1-201ENST00000402375 499 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 AC006946.1-201ENST00000429106 328 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 Y_RNA.639-201ENST00000458981 102 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 RPL21P129-201ENST00000491732 478 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 RNU6-264P-201ENST00000517134 104 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 IGKV2-23-201ENST00000518729 323 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 AC109446.1-201ENST00000566172 220 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 MIR3976-201ENST00000606807 139 ntBASIC4.1□□□□□ -1.75
CCDC113Q9H0I3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms