Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 Y_RNA.1-201ENST00000352915 104 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RNU6-61P-201ENST00000365528 109 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 Y_RNA.367-201ENST00000365544 101 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 MIR454-201ENST00000390180 115 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 MIR767-201ENST00000390228 109 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RNA5SP210-201ENST00000391034 120 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RNU6-387P-201ENST00000411331 105 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 ATG3P1-201ENST00000419507 911 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC007560.1-201ENST00000426912 237 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 MTND1P18-201ENST00000448191 573 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RNU7-23P-201ENST00000459465 62 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC126182.1-201ENST00000478134 357 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RN7SL499P-201ENST00000481141 276 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RPL36AP51-201ENST00000487216 318 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 RNA5SP503-201ENST00000517047 117 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 HMGN2P15-201ENST00000585707 270 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AL355877.2-201ENST00000603670 358 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AL355598.1-201ENST00000604169 202 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC126118.1-201ENST00000607744 628 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC107871.2-201ENST00000612894 502 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC015540.1-201ENST00000615828 501 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC093648.1-201ENST00000623546 606 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 MIR6863-201ENST00000636112 90 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 AC068137.4-201ENST00000638485 296 ntBASIC2.92□□□□□ -1.94
ZNF541Q9H0D2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 RNU4-48P-201ENST00000365559 182 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 RNU6-74P-201ENST00000384235 107 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 Y_RNA.576-201ENST00000384781 102 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AL356057.2-201ENST00000403318 432 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AL353729.1-201ENST00000425044 720 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC010975.2-201ENST00000427781 588 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 TPTE2P5-203ENST00000458118 728 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 RPS29P15-201ENST00000458329 171 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC114786.4-201ENST00000508771 728 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC026436.1-201ENST00000510537 270 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AL391261.3-201ENST00000557194 520 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 MIR1273C-201ENST00000578669 77 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC024619.4-201ENST00000580924 316 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AL138889.2-201ENST00000603883 242 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 AC025449.1-201ENST00000603896 529 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 U6.42-201ENST00000618440 107 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 MIR3199-2-201ENST00000636243 86 ntBASIC2.91□□□□□ -1.94
ZNF541Q9H0D2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ZNF541Q9H0D2 AC016717.2-201ENST00000609089 5141 ntBASIC2.9□□□□□ -1.94
ZNF541Q9H0D2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 MTND4P14-201ENST00000435799 1354 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AL356292.1-201ENST00000283110 373 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 Y_RNA.226-201ENST00000364337 114 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 RN7SKP226-201ENST00000364912 300 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 RNU6-1025P-201ENST00000410629 104 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 OR51A5P-201ENST00000415429 942 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AL714022.1-201ENST00000439897 151 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC091435.1-201ENST00000505442 584 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC109927.2-201ENST00000506416 303 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC108078.1-201ENST00000508073 725 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 Y_RNA.655-201ENST00000515919 96 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AP003072.2-201ENST00000527756 676 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 MIR4782-201ENST00000577987 79 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC008521.1-201ENST00000587471 187 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC005498.1-201ENST00000592125 465 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 DEFB131E-202ENST00000602581 683 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC078795.2-201ENST00000602835 1252 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 MIR6873-201ENST00000622788 63 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC090617.7-201ENST00000623952 126 ntBASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.9□□□□□ -1.95
ZNF541Q9H0D2 MIR1291-201ENST00000627649 87 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms