Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 Y_RNA.623-201ENST00000411128 95 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 RPL7P10-201ENST00000417407 739 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 PGBD4P6-201ENST00000421501 610 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM2Q9C040 SKA2P1-201ENST00000425592 390 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 AP000907.1-201ENST00000428428 510 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM2Q9C040 RPL7P49-201ENST00000471402 708 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 AC110768.1-201ENST00000509222 400 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM2Q9C040 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM2Q9C040 RNU6-1153P-201ENST00000516760 105 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM2Q9C040 HSPE1P7-201ENST00000604681 321 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 RNU6-85P-201ENST00000605989 107 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 AL442067.2-201ENST00000614033 363 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM2Q9C040 U2.21-201ENST00000637295 81 ntBASIC3.2□□□□□ -1.9
TRIM2Q9C040 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM2Q9C040 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM2Q9C040 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM2Q9C040 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM2Q9C040 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC092435.3-201ENST00000565538 3654 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 MIR412-201ENST00000362142 91 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 RNA5SP387-201ENST00000364226 106 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 Z98749.2-208ENST00000381646 500 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC092798.1-201ENST00000458542 409 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 MTCO1P29-201ENST00000496868 288 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC006445.2-201ENST00000510061 472 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC092436.3-201ENST00000511788 257 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 FRG2DP-202ENST00000566967 323 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC113139.1-201ENST00000605049 239 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
TRIM2Q9C040 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM2Q9C040 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM2Q9C040 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM2Q9C040 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM2Q9C040 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 RNU6-562P-201ENST00000362731 107 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM2Q9C040 MIR183-201ENST00000384958 110 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 MIR10A-201ENST00000385043 110 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 RN7SKP158-201ENST00000410453 326 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 NCOR1P3-201ENST00000420479 303 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC099548.1-201ENST00000421443 426 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 TMEM167AP1-201ENST00000423409 219 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AL359672.1-201ENST00000442302 409 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 PRSS3P4-201ENST00000453323 162 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 RNU7-138P-201ENST00000459479 64 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 RN7SL293P-201ENST00000481765 281 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 RPL21P13-201ENST00000488305 481 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 RPS29P20-201ENST00000489592 171 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 HMGB1P30-201ENST00000492455 606 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 RN7SKP24-201ENST00000515888 284 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC104576.1-201ENST00000524225 88 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AMZ2P1-203ENST00000565833 850 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 MIR3922-201ENST00000585192 84 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC006557.5-201ENST00000603126 811 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 ELOCP5-201ENST00000604924 333 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 RMST_8.1-201ENST00000610287 165 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 MTND4LP32-201ENST00000636111 270 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 U6.105-201ENST00000637379 88 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AL513302.2-201ENST00000562313 1842 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC032011.1-201ENST00000611703 1549 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
TRIM2Q9C040 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM2Q9C040 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
TRIM2Q9C040 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM2Q9C040 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
TRIM2Q9C040 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM2Q9C040 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms