Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC087190.4-201ENST00000574616 8334 ntBASIC4.25□□□□□ -1.73
LRRC3Q9BY71 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC3Q9BY71 AC090740.1-201ENST00000623193 2262 ntBASIC4.25□□□□□ -1.73
LRRC3Q9BY71 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
LRRC3Q9BY71 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LRRC3Q9BY71 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LRRC3Q9BY71 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
LRRC3Q9BY71 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LRRC3Q9BY71 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRRC3Q9BY71 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 RNU6-874P-201ENST00000362390 105 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 SNORA60-201ENST00000362396 134 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.288-201ENST00000364854 92 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.461-201ENST00000384263 103 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.592-201ENST00000410274 109 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 MTCO3P29-201ENST00000432119 779 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AC079354.2-201ENST00000453523 154 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 RPS29P27-201ENST00000463711 170 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AC017037.1-201ENST00000508460 471 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 RNU7-175P-201ENST00000515915 61 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 RNU6-397P-201ENST00000516226 104 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AC024153.1-201ENST00000603103 365 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AL713922.2-201ENST00000619384 716 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AC012442.3-202ENST00000636742 206 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 MTND5P7-201ENST00000413558 1798 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 AC007496.3-201ENST00000624987 3443 ntBASIC4.24□□□□□ -1.73
LRRC3Q9BY71 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LRRC3Q9BY71 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 RNU6-858P-201ENST00000362436 107 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.471-201ENST00000384312 102 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 MIR888-201ENST00000401186 77 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 MIR1302-6-201ENST00000408466 90 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC012308.1-201ENST00000451232 178 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC010265.1-201ENST00000513509 211 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 RNU7-143P-201ENST00000516781 65 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 RN7SKP272-201ENST00000516988 232 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC011602.1-201ENST00000546484 331 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 YPEL5P3-201ENST00000547227 352 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC006077.1-201ENST00000604746 343 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC062037.2-201ENST00000610137 73 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AL159153.1-201ENST00000619688 317 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 MIR8062-201ENST00000621515 85 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 AC073308.1-201ENST00000623696 305 ntBASIC4.23□□□□□ -1.73
LRRC3Q9BY71 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.23□□□□□ -1.73
LRRC3Q9BY71 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AC233981.2-201ENST00000611524 1614 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 RNA5SP124-201ENST00000362739 110 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 RNU6-778P-201ENST00000363269 103 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.276-201ENST00000364732 109 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 U3.13-201ENST00000364804 214 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.405-201ENST00000383979 100 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.451-201ENST00000384200 100 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.524-201ENST00000384564 100 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 Y_RNA.561-201ENST00000384694 100 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 PTMAP2-201ENST00000397627 327 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 MIR190B-201ENST00000401119 79 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 RNU6-847P-201ENST00000411115 108 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AP000275.1-201ENST00000411943 390 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 SNRPGP5-201ENST00000456003 220 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 RPL26P9-201ENST00000457466 433 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AC034236.1-201ENST00000469891 373 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AC104564.1-201ENST00000493028 407 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC3Q9BY71 SNORA25.11-201ENST00000515935 105 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 RNU6-1143P-201ENST00000516125 104 ntBASIC4.22□□□□□ -1.73
LRRC3Q9BY71 RNA5SP143-201ENST00000516936 115 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms