Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.74□□□□□ -2.29
SCAPERQ9BY12 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SCAPERQ9BY12 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.74□□□□□ -2.29
SCAPERQ9BY12 AC010900.2-201ENST00000604508 210 ntBASIC0.74□□□□□ -2.29
SCAPERQ9BY12 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.74□□□□□ -2.29
SCAPERQ9BY12 RNU6-884P-201ENST00000363889 107 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 MIR514A1-201ENST00000385133 98 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SCAPERQ9BY12 MIR1283-2-201ENST00000408621 87 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 ZNF863P-201ENST00000426746 417 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 CR769776.1-201ENST00000441254 787 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 MTND1P33-201ENST00000446251 917 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.73□□□□□ -2.29
SCAPERQ9BY12 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.73□□□□□ -2.29
SCAPERQ9BY12 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.73□□□□□ -2.29
SCAPERQ9BY12 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 MIR8074-201ENST00000615081 81 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 AL512506.2-201ENST00000624472 458 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 AC092608.3-201ENST00000625017 386 ntBASIC0.73□□□□□ -2.29
SCAPERQ9BY12 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SCAPERQ9BY12 RNU6-140P-201ENST00000384566 108 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 RNU2-36P-201ENST00000410361 191 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC022483.1-201ENST00000514020 567 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC005832.3-201ENST00000537929 631 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 CR383656.7-201ENST00000548164 174 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 SNRPGP17-201ENST00000603780 214 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AL031176.1-201ENST00000604554 466 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC018618.2-201ENST00000604770 446 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AL359314.1-201ENST00000616913 261 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC073544.1-201ENST00000600110 1595 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 MIR95-201ENST00000385072 81 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 RNU2-47P-201ENST00000410649 186 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC098831.1-201ENST00000440661 216 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 FCF1P6-201ENST00000456841 595 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 RNU6-491P-201ENST00000516099 110 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 CYP2C61P-201ENST00000604072 290 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.72□□□□□ -2.29
SCAPERQ9BY12 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
SCAPERQ9BY12 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC114737.2-201ENST00000421583 173 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 C1DP1-201ENST00000426049 402 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 USP9YP24-201ENST00000434374 697 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 MTCO1P53-201ENST00000441633 699 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 snoU13.9-201ENST00000458927 103 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AL049874.1-201ENST00000489560 388 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 MTCYBP16-201ENST00000509187 1129 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC006199.1-201ENST00000548728 219 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC004217.3-201ENST00000551552 878 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AL391597.1-201ENST00000618707 694 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC068787.1-201ENST00000623908 691 ntBASIC0.71□□□□□ -2.3
SCAPERQ9BY12 AC110491.1-201ENST00000562191 2010 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 RNU6-1164P-201ENST00000364428 107 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 MIR421-201ENST00000365696 85 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 RNU6-741P-201ENST00000383889 107 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 ZNF705CP-201ENST00000530515 889 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AP003122.4-201ENST00000530980 758 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AL359212.1-201ENST00000556608 614 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AC023932.2-201ENST00000603176 175 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AL121890.5-201ENST00000620848 304 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 AP003400.6-201ENST00000624698 740 ntBASIC0.7□□□□□ -2.3
SCAPERQ9BY12 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.7□□□□□ -2.3
SCAPERQ9BY12 MIR29C-201ENST00000385231 88 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SCAPERQ9BY12 RNU2-15P-201ENST00000410692 191 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 CST2P1-201ENST00000425770 87 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.69□□□□□ -2.3
SCAPERQ9BY12 MTND2P24-201ENST00000453434 806 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 AC018868.1-201ENST00000491307 315 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 RPL22P13-201ENST00000493291 347 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 SNORD19.2-201ENST00000516978 73 ntBASIC0.69□□□□□ -2.3
SCAPERQ9BY12 AP003034.1-201ENST00000534621 422 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms