Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC019226.2-201ENST00000625973 424 ntBASIC1.58□□□□□ -2.16
SHANK2-AS3Q9BTD1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SHANK2-AS3Q9BTD1 U8.3-201ENST00000363321 132 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-288P-201ENST00000363690 104 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR17-201ENST00000385012 84 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR518D-201ENST00000385014 87 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORA11.2-201ENST00000408318 127 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU4-53P-201ENST00000410828 140 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPS15AP12-201ENST00000419498 388 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 EIF4EP4-201ENST00000424916 578 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL031667.1-201ENST00000440222 725 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 USP9YP8-201ENST00000441913 500 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 MTND6P13-201ENST00000443510 523 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC124916.1-201ENST00000444020 547 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC007182.2-201ENST00000489251 402 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC109927.2-201ENST00000506416 303 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-581P-201ENST00000516214 105 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU2-10P-201ENST00000516375 211 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-1183P-201ENST00000517054 60 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-1220P-201ENST00000517126 108 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC060788.1-201ENST00000521318 469 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 CBX3P7-201ENST00000532876 502 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR3935-201ENST00000583472 104 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC174048.1-201ENST00000603389 144 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL359999.1-201ENST00000604513 294 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC022893.3-201ENST00000607665 437 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC130324.3-201ENST00000614165 542 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL162373.1-201ENST00000620433 407 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL589994.2-201ENST00000621124 579 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 uc_338.20-201ENST00000621563 178 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR6873-201ENST00000622788 63 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 DUXAP9-208ENST00000622815 614 ntBASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.57□□□□□ -2.16
SHANK2-AS3Q9BTD1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORD56.2-201ENST00000363242 71 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORA16B-201ENST00000364674 135 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-297P-201ENST00000384636 107 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPL23AP32-201ENST00000395315 459 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC114491.1-201ENST00000416095 246 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 MTND2P18-201ENST00000419962 1030 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC027124.2-201ENST00000428249 105 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 RPS6P15-201ENST00000431996 751 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 MTND1P30-201ENST00000441241 901 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL022238.1-201ENST00000442557 355 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-914P-201ENST00000516749 109 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC022616.3-201ENST00000523940 148 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 OR11H5P-201ENST00000554039 926 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC008749.1-201ENST00000597650 306 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC012360.2-201ENST00000609349 391 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC009233.1-201ENST00000616477 371 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 U4atac.1-201ENST00000618345 95 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC010378.1-201ENST00000619270 362 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC091304.6-201ENST00000619761 202 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AP000770.2-201ENST00000623694 100 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AC007494.3-201ENST00000624660 743 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 AP003400.5-201ENST00000624827 617 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 Z99571.1-201ENST00000636677 394 ntBASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
SHANK2-AS3Q9BTD1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 Y_RNA.169-201ENST00000363745 96 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-169P-201ENST00000365336 107 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 RNU6-748P-201ENST00000384648 107 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 MIR558-201ENST00000384920 94 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 SNORA40C-201ENST00000391285 128 ntBASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.55□□□□□ -2.16
SHANK2-AS3Q9BTD1 RN7SKP158-201ENST00000410453 326 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms