Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 Y_RNA.287-201ENST00000364853 94 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 RNU4-11P-201ENST00000365287 132 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 MIR195-201ENST00000385194 87 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 U3.26-201ENST00000391236 204 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 RPL11P3-201ENST00000395256 523 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 EI24P2-201ENST00000397776 1076 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 MIR298-201ENST00000401212 88 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 HSPE1P12-201ENST00000412576 301 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 BX510359.2-201ENST00000417920 305 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHOX2BQ99453 MTND4LP9-201ENST00000427694 174 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC114982.1-201ENST00000469402 321 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC090525.1-201ENST00000479116 478 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC078918.1-201ENST00000498515 228 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC021269.2-201ENST00000532318 330 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC137627.1-201ENST00000545761 289 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 MIR3923-201ENST00000579521 83 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 MIR5688-201ENST00000580619 83 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 AC013791.1-201ENST00000616619 62 ntBASIC5.19□□□□□ -1.58
PHOX2BQ99453 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHOX2BQ99453 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PHOX2BQ99453 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHOX2BQ99453 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 Y_RNA.71-201ENST00000362892 104 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 MIR208B-201ENST00000401172 77 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 AL591419.1-201ENST00000427423 339 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 AC023141.12-201ENST00000512399 199 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 RN7SKP260-201ENST00000516907 149 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 AC022616.8-201ENST00000533569 253 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 AC069294.1-201ENST00000608397 350 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 ABCC13-202ENST00000463099 3842 ntBASIC5.18□□□□□ -1.58
PHOX2BQ99453 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHOX2BQ99453 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PHOX2BQ99453 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHOX2BQ99453 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 AC093591.2-201ENST00000565254 3843 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 AL360270.2-201ENST00000562952 5985 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 U3.3-201ENST00000362986 216 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 Y_RNA.261-201ENST00000364631 102 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 SNORA1.3-201ENST00000384676 136 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 MIR626-201ENST00000385032 94 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 PTMAP5-201ENST00000393073 333 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 BPY2DP-201ENST00000422208 265 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 AC000111.2-201ENST00000448200 210 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 RNU6-513P-201ENST00000516104 104 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 SNORA25.12-201ENST00000516202 82 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 RNU6-971P-201ENST00000516920 106 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 AC023632.4-201ENST00000517783 191 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 AC021739.1-201ENST00000559631 174 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 RN7SL690P-201ENST00000582087 240 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 BMS1P21-201ENST00000634565 365 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 SNORD98-201ENST00000636377 67 ntBASIC5.17□□□□□ -1.58
PHOX2BQ99453 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHOX2BQ99453 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.17□□□□□ -1.58
PHOX2BQ99453 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHOX2BQ99453 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHOX2BQ99453 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 SNORA73.1-201ENST00000363107 205 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms