Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HSPE1P26-201ENST00000405341 275 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL138885.1-201ENST00000405921 675 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 U3.42-201ENST00000408746 214 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC092447.6-201ENST00000414578 210 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL392103.1-201ENST00000447000 198 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC011005.2-201ENST00000487324 359 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 RNA5SP143-201ENST00000516936 115 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-255P-201ENST00000516957 105 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC026403.1-201ENST00000518938 295 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC004024.1-201ENST00000549244 247 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC008739.3-201ENST00000603262 127 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC009779.6-201ENST00000603972 165 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL034351.1-201ENST00000605288 668 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC004792.1-201ENST00000614523 137 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AP001282.2-201ENST00000616149 309 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL159153.1-201ENST00000619688 317 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AC110801.1-201ENST00000623590 212 ntBASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDK5RAP1Q96SZ6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RNA5SP124-201ENST00000362739 110 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-288P-201ENST00000363690 104 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-280P-201ENST00000364145 104 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.785-201ENST00000384290 109 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RPS15AP40-201ENST00000419621 391 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AL606753.1-201ENST00000427435 87 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RPS27AP1-201ENST00000475545 471 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 TRBV12-2-201ENST00000489763 344 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RNA5SP208-201ENST00000516156 78 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 RN7SKP277-201ENST00000516895 283 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AP006587.4-201ENST00000526053 529 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 CYCSP27-201ENST00000527643 293 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 HMGN2P28-201ENST00000606102 262 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 TUG1_2.1-201ENST00000614234 87 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 SNHG22-203ENST00000617833 660 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 AC130454.1-201ENST00000622948 401 ntBASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK5RAP1Q96SZ6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.20-201ENST00000362479 113 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.297-201ENST00000364950 91 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-45P-201ENST00000384471 107 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.518-201ENST00000384552 113 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-14P-201ENST00000384630 106 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 Y_RNA.577-201ENST00000384794 101 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR23B-201ENST00000384832 97 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-174P-201ENST00000410406 106 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 RNU6-293P-201ENST00000411259 106 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 EI24P1-201ENST00000416584 867 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 MYL8P-204ENST00000431574 518 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 CYCSP43-201ENST00000438233 310 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 FCF1P4-201ENST00000448326 183 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 MIR4429-201ENST00000580105 73 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL158827.2-201ENST00000602494 330 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL670379.6-201ENST00000603753 252 ntBASIC3.85□□□□□ -1.79
CDK5RAP1Q96SZ6 AL670379.1-201ENST00000604752 252 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms