Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.237-201ENST00000364439 102 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-395P-201ENST00000365662 106 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-611P-201ENST00000384276 104 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 SNORA19-201ENST00000384737 128 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 MIR215-201ENST00000384858 110 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 MIR93-201ENST00000385024 80 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 LAP3P1-201ENST00000403648 294 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-130P-201ENST00000411112 103 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AL513331.1-201ENST00000411908 397 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 MTATP6P4-201ENST00000427725 675 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC079780.1-201ENST00000428259 207 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 MTND3P9-201ENST00000429526 346 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC091286.1-201ENST00000431233 461 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AL358472.1-201ENST00000431295 329 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 TBCAP1-201ENST00000436520 327 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC069285.2-201ENST00000440210 275 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AL513124.1-201ENST00000450410 614 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 HSPE1P6-201ENST00000479457 291 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC091144.1-201ENST00000519573 138 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC007458.1-201ENST00000542812 373 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC103996.1-201ENST00000555468 102 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 OR4G2P-202ENST00000641004 1759 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNGAP1Q96PV0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.59□□□□□ -1.68
SYNGAP1Q96PV0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SYNGAP1Q96PV0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNGAP1Q96PV0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.20-201ENST00000362479 113 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-595P-201ENST00000363944 107 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-356P-201ENST00000384140 107 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 MIR183-201ENST00000384958 110 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU2-33P-201ENST00000410344 192 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-1203P-201ENST00000410703 110 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU2-71P-201ENST00000411395 189 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AL096701.2-201ENST00000416920 238 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AL158156.1-201ENST00000422509 473 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AL591043.1-201ENST00000432461 424 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AC004383.1-201ENST00000438135 289 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AK3P2-201ENST00000507976 429 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-911P-201ENST00000516523 104 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 CYCSP30-201ENST00000546447 172 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AL161713.1-201ENST00000555538 145 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AC025627.2-201ENST00000576220 160 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AC098826.3-201ENST00000603823 466 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 MIR432-201ENST00000606207 94 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AC087190.4-201ENST00000574616 8334 ntBASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNGAP1Q96PV0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 AL157777.2-201ENST00000258070 137 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.29-201ENST00000362570 113 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.297-201ENST00000364950 91 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 SNORA57.3-201ENST00000411095 141 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 EIF4EP2-201ENST00000422816 654 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 AC130289.1-201ENST00000577321 73 ntBASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNGAP1Q96PV0 AP000560.1-201ENST00000624150 1937 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-173P-201ENST00000364215 104 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 U3.13-201ENST00000364804 214 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 RN7SKP156-201ENST00000410308 342 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AP000275.1-201ENST00000411943 390 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 MLLT10P2-201ENST00000506434 249 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms