Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-235P-201ENST00000362644 107 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-336P-201ENST00000364891 107 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 MIR200C-201ENST00000384980 68 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 BTF3L4P2-201ENST00000392798 346 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 CYCSP19-201ENST00000411715 316 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 LINC02210-201ENST00000444561 288 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 SNORD33.1-201ENST00000516213 88 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 AC048347.1-201ENST00000624621 427 ntBASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
CNTNAP3BQ96NU0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC116096.1-201ENST00000566804 2314 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC004925.1-201ENST00000624256 2706 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 Y_RNA.35-201ENST00000362601 101 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 MIR1290-201ENST00000408735 78 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC006461.1-201ENST00000412637 326 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AL627311.1-201ENST00000431514 115 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AL353705.4-201ENST00000449661 238 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 RPL23AP24-201ENST00000458203 385 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC010265.1-201ENST00000513509 211 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 MIR3921-201ENST00000577308 85 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC011471.1-201ENST00000585766 187 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AL670379.3-201ENST00000605040 251 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC092628.2-201ENST00000622492 339 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 AC106871.1-201ENST00000568324 3102 ntBASIC4.75□□□□□ -1.65
CNTNAP3BQ96NU0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 ADAM5-202ENST00000399789 1942 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNA5SP90-201ENST00000364801 99 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-915P-201ENST00000364943 103 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNU5E-7P-201ENST00000365290 117 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-905P-201ENST00000384434 107 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 SNORD116-21-201ENST00000384507 92 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AL035079.1-201ENST00000405210 287 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNA5SP317-201ENST00000410176 116 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNA5SP311-201ENST00000411290 116 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 BPY2DP-201ENST00000422208 265 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AL356867.1-201ENST00000429623 299 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AL031737.1-201ENST00000450125 223 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 U8.19-201ENST00000459095 133 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RN7SL188P-201ENST00000469842 285 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AF186996.7-201ENST00000492781 209 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-377P-201ENST00000515965 102 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNA5SP315-201ENST00000516340 116 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 RNA5SP312-201ENST00000517068 116 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms