Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC011476.5-201ENST00000615594 130 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.88□□□□□ -1.63
CALR3Q96L12 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CALR3Q96L12 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CALR3Q96L12 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CALR3Q96L12 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CALR3Q96L12 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CALR3Q96L12 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CALR3Q96L12 Y_RNA.20-201ENST00000362479 113 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 RNA5SP151-201ENST00000365632 117 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 U8.10-201ENST00000384260 133 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 RNU6-318P-201ENST00000384283 103 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 RNU1-106P-201ENST00000384382 164 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 AC244670.1-201ENST00000436879 112 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 AL161651.1-201ENST00000440882 223 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 NUTF2P3-201ENST00000448540 384 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.87□□□□□ -1.63
CALR3Q96L12 RNU6-1198P-201ENST00000516904 67 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 AC027288.2-201ENST00000553028 243 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 AC021231.3-201ENST00000558497 370 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 MIR1269B-201ENST00000580405 75 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 AC090897.2-201ENST00000581715 130 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.87□□□□□ -1.63
CALR3Q96L12 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.87□□□□□ -1.63
CALR3Q96L12 AL138963.2-201ENST00000605137 226 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.87□□□□□ -1.63
CALR3Q96L12 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CALR3Q96L12 INTS6P1-201ENST00000504674 2530 ntBASIC4.87□□□□□ -1.63
CALR3Q96L12 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.87□□□□□ -1.63
CALR3Q96L12 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CALR3Q96L12 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CALR3Q96L12 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.87□□□□□ -1.63
CALR3Q96L12 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CALR3Q96L12 AC004944.1-201ENST00000517807 3059 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CALR3Q96L12 RNU6-1159P-201ENST00000362933 107 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 RNU6-622P-201ENST00000384272 103 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 RNU1-44P-201ENST00000384453 163 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CALR3Q96L12 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.86□□□□□ -1.63
CALR3Q96L12 AC140479.3-201ENST00000418944 1126 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 PSMD10P3-201ENST00000437000 448 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 AC096638.1-201ENST00000444678 216 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 RPL39P29-201ENST00000447779 157 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.86□□□□□ -1.63
CALR3Q96L12 RPL36AP41-201ENST00000493820 306 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 RPS23P5-201ENST00000495419 428 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.86□□□□□ -1.63
CALR3Q96L12 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.86□□□□□ -1.63
CALR3Q96L12 TOMM20P2-201ENST00000540082 421 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.86□□□□□ -1.63
CALR3Q96L12 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.86□□□□□ -1.63
CALR3Q96L12 MIR4310-201ENST00000582950 57 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 BPIFA4P-203ENST00000603168 689 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 AL359198.2-201ENST00000611836 194 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 AC005296.1-201ENST00000616145 209 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CALR3Q96L12 AC016588.2-201ENST00000632484 3021 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CALR3Q96L12 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CALR3Q96L12 MFSD8-242ENST00000641690 4199 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CALR3Q96L12 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CALR3Q96L12 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CALR3Q96L12 RBBP8P1-201ENST00000449447 1844 ntBASIC4.86□□□□□ -1.63
CALR3Q96L12 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CALR3Q96L12 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CALR3Q96L12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CALR3Q96L12 Y_RNA.581-201ENST00000391017 97 ntBASIC4.85□□□□□ -1.63
CALR3Q96L12 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.85□□□□□ -1.63
CALR3Q96L12 RNU6-111P-201ENST00000517179 105 ntBASIC4.85□□□□□ -1.63
CALR3Q96L12 DEFB108E-201ENST00000524692 240 ntBASIC4.85□□□□□ -1.63
CALR3Q96L12 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.85□□□□□ -1.63
CALR3Q96L12 AC120057.2-201ENST00000571520 271 ntBASIC4.85□□□□□ -1.63
CALR3Q96L12 AL138880.2-201ENST00000616214 239 ntBASIC4.85□□□□□ -1.63
CALR3Q96L12 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.85□□□□□ -1.63
CALR3Q96L12 AL450472.1-202ENST00000637286 180 ntBASIC4.85□□□□□ -1.63
CALR3Q96L12 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CALR3Q96L12 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CALR3Q96L12 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CALR3Q96L12 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CALR3Q96L12 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CALR3Q96L12 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.85□□□□□ -1.63
CALR3Q96L12 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CALR3Q96L12 AC073073.2-201ENST00000609827 2578 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CALR3Q96L12 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.84□□□□□ -1.63
CALR3Q96L12 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.84□□□□□ -1.63
CALR3Q96L12 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CALR3Q96L12 RNA5SP307-201ENST00000362863 116 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CALR3Q96L12 RNU6-926P-201ENST00000384075 107 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RNU6-937P-201ENST00000384325 106 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 MIR10B-201ENST00000385011 110 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RNU2-20P-201ENST00000410425 191 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RN7SKP213-201ENST00000410746 298 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RN7SKP167-201ENST00000411047 285 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 SNORA74C-2-201ENST00000411179 201 ntBASIC4.84□□□□□ -1.63
CALR3Q96L12 RNA5SP39-201ENST00000411245 120 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms