Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU6-1013P-201ENST00000384180 107 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 MIR548K-201ENST00000408406 116 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AL590632.1-201ENST00000424289 371 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 RPL7P37-201ENST00000425095 738 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 MTND1P14-201ENST00000427400 950 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 SNRPEP9-201ENST00000436794 238 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 RPL32P28-201ENST00000443577 397 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 RPS3AP12-201ENST00000443616 753 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 RNA5SP454-201ENST00000517231 127 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 AP005639.2-201ENST00000527592 928 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC006077.1-201ENST00000604746 343 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS50Q96JG6 AL355365.1-201ENST00000616480 294 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 AC027309.3-201ENST00000623419 351 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 AL359757.2-201ENST00000624309 274 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS50Q96JG6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS50Q96JG6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS50Q96JG6 ZNF519P1-201ENST00000449011 1626 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS50Q96JG6 Y_RNA.135-201ENST00000363439 95 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 SNORD116-11-201ENST00000383882 92 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 Y_RNA.419-201ENST00000384041 102 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 SNORA1.3-201ENST00000384676 136 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 MIR183-201ENST00000384958 110 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RNA5SP38-201ENST00000410750 119 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RNU2-68P-201ENST00000410878 191 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RNU6-1304P-201ENST00000411374 106 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 RPL23AP83-201ENST00000434984 473 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RPS3AP52-201ENST00000435639 297 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AL583843.1-201ENST00000456070 346 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RN7SL601P-201ENST00000471221 293 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RPL30P14-201ENST00000482744 348 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 RNU6-1153P-201ENST00000516760 105 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 CYCSP27-201ENST00000527643 293 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC025423.5-201ENST00000550230 219 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC138761.3-201ENST00000579993 334 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC023043.2-201ENST00000589678 1026 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC016727.1-205ENST00000605437 569 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 AL050343.2-201ENST00000607338 280 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 MIR7975-201ENST00000619350 68 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
VPS50Q96JG6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS50Q96JG6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC073346.2-201ENST00000624724 2058 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS50Q96JG6 MTND5P7-201ENST00000413558 1798 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 FRG1CP-201ENST00000358464 769 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 SNORA14A-201ENST00000364773 135 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 Y_RNA.324-201ENST00000365165 102 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 SNORA70.4-201ENST00000365509 134 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS50Q96JG6 RNU6-217P-201ENST00000384164 104 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 HMGB1P9-201ENST00000429856 646 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 AL590664.1-201ENST00000448065 339 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 Y_RNA.632-201ENST00000459189 102 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 RPL21P10-201ENST00000463521 490 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC093663.1-201ENST00000497190 394 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS50Q96JG6 MTND5P5-201ENST00000503764 376 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC008526.1-201ENST00000509149 338 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 AC074250.1-201ENST00000511117 192 ntBASIC3.34□□□□□ -1.87
VPS50Q96JG6 RNU6-928P-201ENST00000516876 104 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms