Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC012308.1-201ENST00000451232 178 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 RPS29P15-201ENST00000458329 171 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 snoU109.2-201ENST00000459316 135 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC112771.1-201ENST00000463581 102 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC079140.3-201ENST00000511111 550 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 SCARNA13-201ENST00000516672 275 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC135279.1-201ENST00000543493 504 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC136619.2-201ENST00000563361 631 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC006362.1-201ENST00000567392 174 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 PIGPP4-201ENST00000584447 307 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 BNIP3P30-201ENST00000601184 574 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 RN7SKP299-201ENST00000606679 301 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC005609.4-201ENST00000625071 447 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC000403.1-201ENST00000613696 3585 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 SNORA38-201ENST00000363946 132 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 SNORD116-2-201ENST00000384274 95 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 RNU6-45P-201ENST00000384471 107 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 SNORD116-6-201ENST00000384711 96 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 NUP35P1-201ENST00000422734 947 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AL365400.1-201ENST00000431854 640 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 RPL7P12-201ENST00000446719 750 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 Z83846.1-201ENST00000446798 265 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 MTND1P18-201ENST00000448191 573 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AL356010.1-201ENST00000456364 102 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC079382.1-201ENST00000493346 557 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 SMURF2P1-201ENST00000514992 481 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 RPL7P20-201ENST00000520308 745 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC069200.1-201ENST00000609511 323 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 AC084757.4-201ENST00000616350 526 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS33AQ96AX1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.61□□□□□ -1.99
VPS33AQ96AX1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 MIR422A-201ENST00000362286 90 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 SNORA38.1-201ENST00000364172 131 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 RNU2-3P-201ENST00000410144 191 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC083906.5-201ENST00000503722 328 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 MTND3P25-201ENST00000509243 135 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC074344.1-201ENST00000512823 224 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC105417.1-201ENST00000514691 285 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 LRRC34P2-201ENST00000514850 553 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AP002404.1-201ENST00000532005 451 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC027176.1-201ENST00000560204 514 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 NBR2-204ENST00000587322 63 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC025449.1-201ENST00000603896 529 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC021646.1-201ENST00000605469 484 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC245008.1-201ENST00000608123 476 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AP001596.2-201ENST00000608410 312 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 AC026585.1-201ENST00000619582 524 ntBASIC2.6□□□□□ -1.99
VPS33AQ96AX1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS33AQ96AX1 ZNF680P1-201ENST00000436625 1469 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AC073346.2-201ENST00000624724 2058 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL139276.1-201ENST00000311910 1001 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 SNORD114-19-201ENST00000363072 75 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 RNU6-715P-201ENST00000365204 103 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL133475.1-201ENST00000404414 305 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.59□□□□□ -1.99
VPS33AQ96AX1 PGBD4P6-201ENST00000421501 610 ntBASIC2.59□□□□□ -1.99
VPS33AQ96AX1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms