Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.26□□□□□ -1.73
BRF1Q92994 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BRF1Q92994 RN7SL283P-201ENST00000489055 303 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 AC093852.1-201ENST00000503587 266 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 AC105758.1-201ENST00000506038 399 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.26□□□□□ -1.73
BRF1Q92994 Vault.1-201ENST00000516474 102 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 HSBP1P1-201ENST00000555205 166 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 AC100812.1-201ENST00000607622 580 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 AL731566.2-201ENST00000618971 317 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRF1Q92994 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.25□□□□□ -1.73
BRF1Q92994 AC007685.1-201ENST00000329806 452 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 Y_RNA.106-201ENST00000363189 100 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNU6-238P-201ENST00000363313 106 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNU4-42P-201ENST00000364738 142 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNA5SP51-201ENST00000364750 119 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 SNORD14.1-201ENST00000365609 90 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNU6-26P-201ENST00000383985 107 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BRF1Q92994 Y_RNA.623-201ENST00000411128 95 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AC006946.1-201ENST00000429106 328 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AL445584.1-201ENST00000431451 330 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RPS15AP10-201ENST00000432472 382 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.25□□□□□ -1.73
BRF1Q92994 AC084357.1-201ENST00000473404 255 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AC078918.1-201ENST00000498515 228 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 NDUFB4P9-201ENST00000511646 388 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 Y_RNA.668-201ENST00000516233 93 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 SNORA70.16-201ENST00000516390 95 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNU7-4P-201ENST00000516961 62 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNA5SP290-201ENST00000517133 127 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 RNA5SP291-201ENST00000517222 105 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.25□□□□□ -1.73
BRF1Q92994 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.25□□□□□ -1.73
BRF1Q92994 AC106785.1-201ENST00000565935 262 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.25□□□□□ -1.73
BRF1Q92994 MIR4738-201ENST00000579134 87 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AL645944.1-201ENST00000603857 493 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AC006077.1-201ENST00000604746 343 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AC107871.2-201ENST00000612894 502 ntBASIC4.25□□□□□ -1.73
BRF1Q92994 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.25□□□□□ -1.73
BRF1Q92994 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.25□□□□□ -1.73
BRF1Q92994 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BRF1Q92994 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BRF1Q92994 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.24□□□□□ -1.73
BRF1Q92994 RPL9P7-201ENST00000330965 580 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-37P-201ENST00000362692 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-11P-201ENST00000364234 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-7-201ENST00000364784 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-8-201ENST00000365467 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-25P-201ENST00000383873 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-1-201ENST00000383898 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-48P-201ENST00000384161 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-36P-201ENST00000384172 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-4P-201ENST00000384205 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-5P-201ENST00000384238 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-3P-201ENST00000384314 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 Y_RNA.476-201ENST00000384347 108 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-16P-201ENST00000384385 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-15P-201ENST00000384534 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-1222P-201ENST00000384615 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-2-201ENST00000384627 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-29P-201ENST00000384637 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-9-201ENST00000384776 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-33P-201ENST00000384793 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 NUP35P1-201ENST00000422734 947 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 AL353997.1-201ENST00000432936 108 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 AL513043.1-201ENST00000439124 535 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 CHEK2P4-201ENST00000450340 246 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RPL9P9-202ENST00000466501 579 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 AC133134.1-201ENST00000466800 359 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RPL22P13-201ENST00000493291 347 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-1271P-201ENST00000517049 105 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.24□□□□□ -1.73
BRF1Q92994 RNU6-6P-201ENST00000606623 107 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 MIR3976-201ENST00000606807 139 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.24□□□□□ -1.73
BRF1Q92994 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.24□□□□□ -1.73
BRF1Q92994 AC008568.2-201ENST00000623862 2313 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 CEP170P1-201ENST00000502249 4587 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRF1Q92994 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRF1Q92994 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.24□□□□□ -1.73
BRF1Q92994 MTND5P27-201ENST00000428871 1720 ntBASIC4.24□□□□□ -1.73
BRF1Q92994 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF1Q92994 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
BRF1Q92994 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF1Q92994 Y_RNA.48-201ENST00000362710 103 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 RNU6-1317P-201ENST00000364582 104 ntBASIC4.23□□□□□ -1.73
BRF1Q92994 SNORA40C-201ENST00000391285 128 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms